Search   for 
Find Your Gene ·  Publications ·  Tools ·  Gene List Suite ·  Expression Atlases ·  About PLEXdb ·  Feedback
Login ID:
Password:
Plants
Arabidopsis
Barley
Brachypodium
Citrus
Cotton
Grape
Maize
Medicago
Poplar
Rice
Soybean
Sugarcane
Tomato
Wheat
Pathogens & Symbionts
Search Experiments
Download Data
Gene List Suite
Tools
Your Account
Documentation
News
Personnel
Links
 Data Release Policy 
PLEXdb is committed to making expression data publicly available to researchers world-wide...
complete policy
 

Browse AraPLEX Experiment Data

Choose an experiment:
Microarray analysis of cross-talks between Jasmonate acid and ethylene signaling in Arabidopsis seedlings
Hongwei Guo, Peking University, College of Life Sciences (hongweig@pku.edu.cn)
Experiment design (12 hybridizations)
strain
•Col-0 •coi1-2 •ein3eil1
treatment
•Mock •MeJA

This experiment has been imported by PLEXdb from NCBI GEO (GSE21762) Series_summary: Jasmonate and ethylene are two important plant hormones c...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

Show
Experiment Name: Microarray analysis of cross-talks between Jasmonate acid and ethylene signaling in Arabidopsis seedlings
Accession No: AT98
Microarray: ATH1-121501
Visibility: public
Experiment Type:
Experiment Factor(s):
strain
•Col-0   •coi1-2   •ein3eil1
treatment
•Mock   •MeJA
Quality Control: biological replicates
Treatment summary:
 strain  treatment  # replicates
 Col-0  Mock  2
 Col-0  MeJA  2
 coi1-2  Mock  2
 coi1-2  MeJA  2
 ein3eil1  Mock  2
 ein3eil1  MeJA  2
Total hybridizations: 12
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE21762)

Series_summary:
Jasmonate and ethylene are two important plant hormones contributing plant resistance to biotic stresses synergistically. Our experimental results showed that two ethylene activated transcription factors (EIN3/EIL1) integrated both jasmonate and ethylene signaling in multiple developmental and defense events. To understand the importance of EIN3/EIL1 in jasmonate signaling, we utilized microarray analysis to identify how much the jasmonate regulated genes are governed by EIN3/EIL1. Our results indicated that EIN3/EIL1 act sequentially in a cascade of transcriptional regulation initiated by jasmonate.

Series_overall_design:
Compare the JA regulated genes in Col-0, coi1-2 and ein3 eil1 to identify how much transcripts are dependent on COI1 or EIN3/EIL1
Publication: none
Created: 2010-09-24 11:45:31
Last Update: 2010-09-27 13:42:50
Released: 2010-10-18
GEO Accession GSE21762
Submitter: PLEXdb Curator
Name: Hongwei Guo
Institution: Peking University, College of Life Sciences
Head of Laboratory: Hongwei Guo
email(s):
Homepage:

 
Copyright@2001-2013 The PLEXdb Group
All rights reserved.

For problems with the webpages contact PLEXdb webmasters