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Browse BarleyBase Experiment Data

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Barley Germination and Seedling Growth Time Course
Yong-qiang An, USDA-ARS-Plant Genetics Research Unit, Donald Danforth Plant Science Center, UD Department of Agriculture, Saint Louis, Missouri (yong-qiang.an@ars.usda.gov)
Experiment design (18 hybridizations)
developmental stage name
•stage S0 •stage S1 •stage S2 •stage S3 •stage S4 •stage S5

This experiment has been imported by PLEXdb from NCBI GEO (GSE23595)

Series_summary:
Analysis of barley grains/seedlings representing...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Barley Germination and Seedling Growth Time Course
Accession No: BB106
Microarray: Barley1
Visibility: public
Experiment Type:
Experiment Factor(s):
developmental stage name
•stage S0   •stage S1   •stage S2   •stage S3   •stage S4   •stage S5
Quality Control: biological replicates
Treatment summary:
 developmental stage name  # replicates
 stage S0  3
 stage S1  3
 stage S2  3
 stage S3  3
 stage S4  3
 stage S5  3
Total hybridizations: 18
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE23595)

Series_summary:
Analysis of barley grains/seedlings representing six well characterized and distinct germination stages over the course of seed germination and seedling growth.

Series_overall_design:
Three biological replications, six developmental stages.


PLEXdb Curator's Note:

One of the treatment (stage S5 ) shows lower correlation among the replicates.
Publication: 'Transcriptional regulatory programs underlying barley germination and regulatory functions of Gibberellin and abscisic acid.', An YQ, Lin L.
BMC Plant Biol 2011 Jun 13;11:105.
pubmed: 21668981
Created: 2011-08-05 09:48:33
Last Update: 2011-08-10 12:53:17
Released: 2011-08-10
GEO Accession GSE23595
Submitter: PLEXdb Curator
Name: Yong-qiang An
Institution: USDA-ARS-Plant Genetics Research Unit, Donald Danforth Plant Science Center, UD Department of Agriculture, Saint Louis, Missouri
Head of Laboratory: Yong-qiang An
email(s):
Homepage:

 
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