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Transcriptome analysis of Bowman vs 4 tillering mutants at 4 developmental stages
Seungho Cho, University of Minnesota (seungho.cho@basf.com, seungho_cho@hotmail.com, muehl003@umn.edu )
Experiment design (60 hybridizations)
developmental stage
•young seedling •crown •immature inflorescence •immature embryo
genotype
•Bowman •als-Bowman •lnt-Bowman •cul2-Bowman •cul4-Bowman

Transcript profiles in Bowman and 4 different tillering mutants, cul2, cul4, als and lnt, were examined at 4 different developmental stages, 3 days...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Transcriptome analysis of Bowman vs 4 tillering mutants at 4 developmental stages
Accession No: BB47
Microarray: Barley1
Visibility: public
Experiment Type:
Experiment Factor(s):
developmental stage
•young seedling  •crown  •immature inflorescence  •immature embryo
genotype
•Bowman  •als-Bowman  •lnt-Bowman  •cul2-Bowman  •cul4-Bowman
Quality Control: biological replicates
Treatment summary:
 developmental stage  genotype  # replicates
 young seedling  Bowman  3
 young seedling  als-Bowman  3
 young seedling  lnt-Bowman  3
 young seedling  cul2-Bowman  3
 young seedling  cul4-Bowman  3
 crown  Bowman  3
 crown  als-Bowman  3
 crown  lnt-Bowman  3
 crown  cul2-Bowman  3
 crown  cul4-Bowman  3
 immature inflorescence  Bowman  3
 immature inflorescence  als-Bowman  3
 immature inflorescence  lnt-Bowman  3
 immature inflorescence  cul2-Bowman  3
 immature inflorescence  cul4-Bowman  3
 immature embryo  Bowman  3
 immature embryo  als-Bowman  3
 immature embryo  lnt-Bowman  3
 immature embryo  cul2-Bowman  3
 immature embryo  cul4-Bowman  3
Total hybridizations: 60
Description: Transcript profiles in Bowman and 4 different tillering mutants, cul2, cul4, als and lnt, were examined at 4 different developmental stages, 3 days old seedling, immature embryo, immature inflorescence and crown.
Publication: 'The genetics of barley low-tillering mutants: absent lower laterals (als).', Dabbert T, Okagaki RJ, Cho S, Boddu J, Muehlbauer GJ.
Theor Appl Genet. 2009 May;118(7):1351-60.
pubmed: 19241055
Created: 2006-07-26 11:12:34
Last Update: 2008-04-14 17:03:47
Submitter: Seungho Cho
Name: Seungho Cho
Institution: University of Minnesota
Head of Laboratory: Muehlbauer
email(s):
Homepage:

 
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