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Browse BarleyBase Experiment Data

Choose an experiment:
barley stem rust interaction
ling zhang, Washington state university (lzhang1@wsu.edu)
Experiment design (68 hybridizations)
genotype
•GP •Rpg1 transgenic
pathogen isolates
•mcc •qcc
time
•0 •6 •12 •18 •24 •36

barley-stem rust interaction time course experiment[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: barley stem rust interaction
Accession No: BB49
Microarray: Barley1
Visibility: public
Experiment Type:
Experiment Factor(s):
genotype
•GP  •Rpg1 transgenic
pathogen isolates
•mcc  •qcc
time
•0  •6  •12  •18  •24  •36
Quality Control:
Treatment summary:
 genotype  pathogen isolates  time  # replicates
 GP  mcc  0  3
 GP  mcc  6  2
 GP  mcc  12  3
 GP  mcc  18  3
 GP  mcc  24  3
 GP  mcc  36  3
 GP  qcc  0  3
 GP  qcc  6  3
 GP  qcc  12  2
 GP  qcc  18  3
 GP  qcc  24  2
 GP  qcc  36  3
 Rpg1 transgenic  mcc  0  3
 Rpg1 transgenic  mcc  6  3
 Rpg1 transgenic  mcc  12  2
 Rpg1 transgenic  mcc  18  3
 Rpg1 transgenic  mcc  24  3
 Rpg1 transgenic  mcc  36  3
 Rpg1 transgenic  qcc  0  3
 Rpg1 transgenic  qcc  6  3
 Rpg1 transgenic  qcc  12  3
 Rpg1 transgenic  qcc  18  3
 Rpg1 transgenic  qcc  24  3
 Rpg1 transgenic  qcc  36  3
Total hybridizations: 68
Description: barley-stem rust interaction time course experiment
Publication: 'Parallel expression profiling of barley-stem rust interactions', Zhang L, Castell-Miller C, Dahl S, Steffenson B, Kleinhofs A.
Funct Integr Genomics. 2008 Jan 15 [Epub ahead of print].
pubmed: 18196301
Created: 2007-10-02 13:16:48
Last Update: 2008-08-05 11:39:31
Submitter: ling zhang
Name: ling zhang
Institution: Washington state university
Head of Laboratory:
email(s):
Homepage:

 
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