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Experiment Name:

Mapping barley genes to chromosome arms by transcript profiling of wheat-barley ditelosomic chromosome addition lines

Accession No:

BB55

Microarray:

Barley1

Visibility:

public

Experiment Type:

Experiment Factor(s):

genotype: •CS (Chinese Spring) •Betzes •1HS •2HS •3HS •3HL •4HS •4HL •5HS •5HL •7HS •7HL

Quality Control:

biological replicates

Treatment summary:

genotype	# replicates
CS (Chinese Spring)	3
Betzes	3
1HS	3
2HS	3
3HS	3
3HL	3
4HS	3
4HL	3
5HS	3
5HL	3
7HS	3
7HL	3

Total hybridizations: 36

Description:

We utilized the Barley1 Affymetrix GeneChip for comparative transcript analysis of Betzes barley, Chinese Spring wheat, and Chinese Spring–Betzes ditelosomic chromosome addition lines to physically map barley genes to their respective chromosome arm locations. We mapped barley genes to chromosome arms (1HS, 2HS, 2HL, 3HS, 3HL, 4HS, 4HL, 5HS, 5HL, 7HS, and 7HL) based on their transcript levels in the ditelosomic addition lines.

Submitted at NCBI GEO via PLEXdb.

Publication:

'Mapping barley genes to chromosome arms by transcript profiling of wheat-barley ditelosomic chromosome addition lines', Bilgic, H., Cho, S., Garvin, D.F., and Muehlbauer, G.J.
2007. Genome 50(9):898-906
pubmed: 18059553

Created:

2007-04-24 10:58:58

Last Update:

2008-08-05 11:42:09

GEO Accession

GSE33400

Submitter:

Hatice Bilgic

Experimenter:

Name:	Hatice Bilgic
Institution:	Univ. of Minnesota
Head of Laboratory:	Gary Muehlbauer
email(s):	bilgi001@umn.edu
Homepage:


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