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Browse BarleyBase Experiment Data

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Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants
Jan Svensson, UC Riverside (timothy.close@ucr.edu)
Experiment design (30 hybridizations)
temperature
•3 C •20 C
genotype
•Wild type cv. Bonus •Xantha-b12 •Xantha-s46 •Albina-f17 •Albina-e16

In this work we investigated four chloroplast barley mutants (albina e16, albina f17, xantha s46, and xantha b12; Henningsen et al., 1993) and the ...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants
Accession No: BB65
Microarray: Barley1
Visibility: public
Experiment Type:
Experiment Factor(s):
temperature
•3 C  •20 C
genotype
•Wild type cv. Bonus   •Xantha-b12   •Xantha-s46   •Albina-f17   •Albina-e16
Quality Control: biological replicates
Treatment summary:
 temperature  genotype  # replicates
 3 C  Wild type cv. Bonus  3
 3 C  Xantha-b12  3
 3 C  Xantha-s46  3
 3 C  Albina-f17  3
 3 C  Albina-e16  3
 20 C  Wild type cv. Bonus  3
 20 C  Xantha-b12  3
 20 C  Xantha-s46  3
 20 C  Albina-f17  3
 20 C  Albina-e16  3
Total hybridizations: 30
Description: In this work we investigated four chloroplast barley mutants (albina e16, albina f17, xantha s46, and xantha b12; Henningsen et al., 1993) and the corresponding wild type with the Affymetrix Barley1 GeneChip to assess the effect of the
chloroplast on the expression of cold-regulated genes.
Publication: 'Transcriptome Analysis of Cold Acclimation in Barley Albina and Xantha Mutants', Jan T. Svensson, Cristina Crosatti, Chiara Campoli, Roberto Bassi, Antonio Michele Stanca, Timothy J. Close and Luigi Cattivelli
Plant Physiology May 2006, Vol. 141, pp. 257–270
pubmed: 16603669
Created: 2009-03-24 08:53:37
Last Update: 2009-03-31 03:20:19
GEO Accession GSE10332
Submitter: jan t svensson
Name: Jan Svensson
Institution: UC Riverside
Head of Laboratory: Timothy J. Close
email(s):
Homepage:

 
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