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Browse BarleyBase Experiment Data

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Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
Harkamal,,Walia, University of California, Davis, CA (hwalia@ucdavis.edu)
Experiment design (24 hybridizations)
stress condition
•salt •control
genotype
•Golden Promise •Maythorpe
organism part name
•root •shoot

This experiment has been imported by PLEXdb from NCBI GEO (GSE6325)

Series_summary: Salt Stress response of salt-tolerant genotype Golden...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Array-based genotyping and expression analysis of barley cv. Maythorpe and Golden Promise
Accession No: BB78
Microarray: Barley1
Visibility: public
Experiment Type:
Experiment Factor(s):
stress condition
•salt   •control
genotype
•Golden Promise   •Maythorpe
organism part name
•root   •shoot
Quality Control: biological replicates
Treatment summary:
 stress condition  genotype  organism part name  # replicates
 salt  Golden Promise  root  3
 salt  Golden Promise  shoot  3
 salt  Maythorpe  root  3
 salt  Maythorpe  shoot  3
 control  Golden Promise  root  3
 control  Golden Promise  shoot  3
 control  Maythorpe  root  3
 control  Maythorpe  shoot  3
Total hybridizations: 24
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE6325)

Series_summary:
Salt Stress response of salt-tolerant genotype Golden Promise compared to Maythorpe
Barley1 GeneChip was used to find differential expression between two barley genotypes under control and salt stress conditions at vegetative stage of growth

Keywords: genotype and treatment comparison

Series_overall_design:
Roots (tips) and shoot (crown and growing point) tissue was used for hybridization to GeneChips
Publication: none
Created: 2009-07-22 16:11:08
Last Update: 2009-07-22 16:31:42
GEO Accession GSE6325
Submitter: PLEXdb Curator
Name: Harkamal,,Walia
Institution: University of California, Davis, CA
Head of Laboratory: --
email(s):
Homepage:

 
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