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Genetic regulation of barley gene expression in response to the powdery mildew fungus, Blumeria graminis f. sp. hordei (Bgh)
Roger Wise, USDA-ARS / Iowa State University (rpwise@iastate.edu)
Experiment design (168 hybridizations)
genotype
•Q21861 •SM89010 •QxSM001 •QxSM002 •QxSM003 •QxSM005 •QxSM008 •QxSM010 •QxSM011 •QxSM013 •QxSM014 •QxSM015 •QxSM016 •QxSM017 •QxSM018 •QxSM019 •QxSM023 •QxSM026 •QxSM028 •QxSM029 •QxSM030 •QxSM031 •QxSM033 •QxSM034 •QxSM035 •QxSM036 •QxSM037 •QxSM038 •QxSM039 •QxSM041 •QxSM042 •QxSM043 •QxSM045 •QxSM046 •QxSM047 •QxSM048 •QxSM049 •QxSM050 •QxSM052 •QxSM054 •QxSM055 •QxSM056 •QxSM057 •QxSM058 •QxSM059 •QxSM060 •QxSM061 •QxSM062 •QxSM063 •QxSM065 •QxSM066 •QxSM067 •QxSM068 •QxSM069 •QxSM070 •QxSM073 •QxSM074 •QxSM075 •QxSM076 •QxSM077 •QxSM078 •QxSM079 •QxSM080 •QxSM082 •QxSM083 •QxSM084 •QxSM085 •QxSM086 •QxSM087 •QxSM088 •QxSM089 •QxSM090 •QxSM091 •QxSM093 •QxSM094 •QxSM095 •QxSM097 •CI 16137
time
•16 hai •32 hai

Expression analysis was performed on total RNA from the Q21861 and SM89010 barley lines, and 75 derived doubled haploid progeny, with CI 16137 incl...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Genetic regulation of barley gene expression in response to the powdery mildew fungus, Blumeria graminis f. sp. hordei (Bgh)
Accession No: BB96
Microarray: Barley1
Visibility: public
Experiment Type:
Experiment Factor(s):
genotype
•Q21861   •SM89010   •QxSM001   •QxSM002   •QxSM003   •QxSM005   •QxSM008   •QxSM010   •QxSM011   •QxSM013   •QxSM014   •QxSM015   •QxSM016   •QxSM017   •QxSM018   •QxSM019   •QxSM023   •QxSM026   •QxSM028   •QxSM029   •QxSM030   •QxSM031   •QxSM033   •QxSM034   •QxSM035   •QxSM036   •QxSM037   •QxSM038   •QxSM039   •QxSM041   •QxSM042   •QxSM043   •QxSM045   •QxSM046   •QxSM047   •QxSM048   •QxSM049   •QxSM050   •QxSM052   •QxSM054   •QxSM055   •QxSM056   •QxSM057   •QxSM058   •QxSM059   •QxSM060   •QxSM061   •QxSM062   •QxSM063   •QxSM065   •QxSM066   •QxSM067   •QxSM068   •QxSM069   •QxSM070   •QxSM073   •QxSM074   •QxSM075   •QxSM076   •QxSM077   •QxSM078   •QxSM079   •QxSM080   •QxSM082   •QxSM083   •QxSM084   •QxSM085   •QxSM086   •QxSM087   •QxSM088   •QxSM089   •QxSM090   •QxSM091   •QxSM093   •QxSM094   •QxSM095   •QxSM097   •CI 16137
time
•16 hai  •32 hai
Quality Control: biological replicates
Treatment summary:
 genotype  time  # replicates
 Q21861  16 hai  4
 Q21861  32 hai  4
 SM89010  16 hai  4
 SM89010  32 hai  4
 QxSM001  16 hai  1
 QxSM001  32 hai  1
 QxSM002  16 hai  1
 QxSM002  32 hai  1
 QxSM003  16 hai  1
 QxSM003  32 hai  1
 QxSM005  16 hai  1
 QxSM005  32 hai  1
 QxSM008  16 hai  1
 QxSM008  32 hai  1
 QxSM010  16 hai  1
 QxSM010  32 hai  1
 QxSM011  16 hai  1
 QxSM011  32 hai  1
 QxSM013  16 hai  1
 QxSM013  32 hai  1
 QxSM014  16 hai  1
 QxSM014  32 hai  1
 QxSM015  16 hai  1
 QxSM015  32 hai  1
 QxSM016  16 hai  1
 QxSM016  32 hai  1
 QxSM017  16 hai  1
 QxSM017  32 hai  1
 QxSM018  16 hai  1
 QxSM018  32 hai  1
 QxSM019  16 hai  1
 QxSM019  32 hai  1
 QxSM023  16 hai  1
 QxSM023  32 hai  1
 QxSM026  16 hai  1
 QxSM026  32 hai  1
 QxSM028  16 hai  1
 QxSM028  32 hai  1
 QxSM029  16 hai  1
 QxSM029  32 hai  1
 QxSM030  16 hai  1
 QxSM030  32 hai  1
 QxSM031  16 hai  1
 QxSM031  32 hai  1
 QxSM033  16 hai  1
 QxSM033  32 hai  1
 QxSM034  16 hai  1
 QxSM034  32 hai  1
 QxSM035  16 hai  1
 QxSM035  32 hai  1
 QxSM036  16 hai  1
 QxSM036  32 hai  1
 QxSM037  16 hai  1
 QxSM037  32 hai  1
 QxSM038  16 hai  1
 QxSM038  32 hai  1
 QxSM039  16 hai  1
 QxSM039  32 hai  1
 QxSM041  16 hai  1
 QxSM041  32 hai  1
 QxSM042  16 hai  1
 QxSM042  32 hai  1
 QxSM043  16 hai  1
 QxSM043  32 hai  1
 QxSM045  16 hai  1
 QxSM045  32 hai  1
 QxSM046  16 hai  1
 QxSM046  32 hai  1
 QxSM047  16 hai  1
 QxSM047  32 hai  1
 QxSM048  16 hai  1
 QxSM048  32 hai  1
 QxSM049  16 hai  1
 QxSM049  32 hai  1
 QxSM050  16 hai  1
 QxSM050  32 hai  1
 QxSM052  16 hai  1
 QxSM052  32 hai  1
 QxSM054  16 hai  1
 QxSM054  32 hai  1
 QxSM055  16 hai  1
 QxSM055  32 hai  1
 QxSM056  16 hai  1
 QxSM056  32 hai  1
 QxSM057  16 hai  1
 QxSM057  32 hai  1
 QxSM058  16 hai  1
 QxSM058  32 hai  1
 QxSM059  16 hai  1
 QxSM059  32 hai  1
 QxSM060  16 hai  1
 QxSM060  32 hai  1
 QxSM061  16 hai  1
 QxSM061  32 hai  1
 QxSM062  16 hai  1
 QxSM062  32 hai  1
 QxSM063  16 hai  1
 QxSM063  32 hai  1
 QxSM065  16 hai  1
 QxSM065  32 hai  1
 QxSM066  16 hai  1
 QxSM066  32 hai  1
 QxSM067  16 hai  1
 QxSM067  32 hai  1
 QxSM068  16 hai  1
 QxSM068  32 hai  1
 QxSM069  16 hai  1
 QxSM069  32 hai  1
 QxSM070  16 hai  1
 QxSM070  32 hai  1
 QxSM073  16 hai  1
 QxSM073  32 hai  1
 QxSM074  16 hai  1
 QxSM074  32 hai  1
 QxSM075  16 hai  1
 QxSM075  32 hai  1
 QxSM076  16 hai  1
 QxSM076  32 hai  1
 QxSM077  16 hai  1
 QxSM077  32 hai  1
 QxSM078  16 hai  1
 QxSM078  32 hai  1
 QxSM079  16 hai  1
 QxSM079  32 hai  1
 QxSM080  16 hai  1
 QxSM080  32 hai  1
 QxSM082  16 hai  1
 QxSM082  32 hai  1
 QxSM083  16 hai  1
 QxSM083  32 hai  1
 QxSM084  16 hai  1
 QxSM084  32 hai  1
 QxSM085  16 hai  1
 QxSM085  32 hai  1
 QxSM086  16 hai  1
 QxSM086  32 hai  1
 QxSM087  16 hai  1
 QxSM087  32 hai  1
 QxSM088  16 hai  1
 QxSM088  32 hai  1
 QxSM089  16 hai  1
 QxSM089  32 hai  1
 QxSM090  16 hai  1
 QxSM090  32 hai  1
 QxSM091  16 hai  1
 QxSM091  32 hai  1
 QxSM093  16 hai  1
 QxSM093  32 hai  1
 QxSM094  16 hai  1
 QxSM094  32 hai  1
 QxSM095  16 hai  1
 QxSM095  32 hai  1
 QxSM097  16 hai  1
 QxSM097  32 hai  1
 CI 16137  16 hai  1
 CI 16137  32 hai  1
Total hybridizations: 168
Description: Expression analysis was performed on total RNA from the Q21861 and SM89010 barley lines, and 75 derived doubled haploid progeny, with CI 16137 included as an internal Mla1 allele control. Samples were blocked by time-point and completely randomized within each block. For each sample, seven day old seedlings were inoculated with Blumeria graminis f. sp. hordei (Bgh) isolate 5874 (AVRa1, AVRa6, AVRa12), and first leaves were collected at 16 and 32 hours after inoculation (HAI).
Publication: none
Created: 2010-04-09 16:32:53
Last Update: 2010-11-17 11:11:58
Released: 2016-09-21
Submitter: Greg S Fuerst
Name: Roger Wise
Institution: USDA-ARS / Iowa State University
Head of Laboratory: Roger P. Wise
email(s):
Homepage:

 
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