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Browse SoyPLEX Experiment Data

Choose an experiment:
Soy LGI Protein NILs, seed fill
Yung-Tsi Bolon, USDA-ARS (hsie0024@umn.edu,vance004@umn.edu)
Experiment design (24 hybridizations)
genotype
•LoProt •HiProt
time
•25-50 •>50-100 •>100-200 •>200-300

Evaluation of transcripts from soybean seed tissue during seed fill for a pair of near-isogenic lines contrasting in seed protein and oil and carry...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Soy LGI Protein NILs, seed fill
Accession No: GM11
Microarray: Soybean
Visibility: public
Experiment Type:
Experiment Factor(s):
genotype
•LoProt   •HiProt
time
•25-50   •>50-100   •>100-200   •>200-300
Quality Control: biological replicates
Treatment summary:
 genotype  time  # replicates
 LoProt  25-50  3
 LoProt  >50-100  3
 LoProt  >100-200  3
 LoProt  >200-300  3
 HiProt  25-50  3
 HiProt  >50-100  3
 HiProt  >100-200  3
 HiProt  >200-300  3
Total hybridizations: 24
Description: Evaluation of transcripts from soybean seed tissue during seed fill for a pair of near-isogenic lines contrasting in seed protein and oil and carrying an introgression at the linkage group I protein QTL region.

Submitted at NCBI GEO via PLEXdb.

Publication: 'Complementary genetic and genomic approaches help characterize the linkage group I seed protein QTL in soybean', Bolon YT, Joseph B, Cannon SB, Graham MA, Diers BW, Farmer AD, May GD, Muehlbauer GJ, Specht JE, Tu ZJ, Weeks N, Xu WW, Shoemaker RC, Vance CP.
BMC Plant Biol. 2010 Mar 3;10:41
pubmed: 20199683
Created: 2009-05-08 15:23:27
Last Update: 2009-05-11 14:36:23
Released: 2011-02-24
GEO Accession GSE33408
Submitter: Yung-Tsi Bolon
Name: Yung-Tsi Bolon
Institution: USDA-ARS
Head of Laboratory: Carroll Vance
email(s):
Homepage:

 
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