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Browse SoyPLEX Experiment Data

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Storage Protein Suppression in Transgenic Soybean Cotyledons
monica,,schmidt, Danforth Center, St.Louis, MO (--)
Experiment design (6 hybridizations)
genetic line
•WT_non-transgenic •RNAi_transgenic

This experiment has been imported by PLEXdb from NCBI GEO (GSE12314)

Series_summary:
Suppression of both endogenous storage proteins ...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Storage Protein Suppression in Transgenic Soybean Cotyledons
Accession No: GM23
Microarray: Soybean
Visibility: public
Experiment Type:
Experiment Factor(s):
genetic line
•WT_non-transgenic   •RNAi_transgenic
Quality Control: biological replicates,technical replicates
Treatment summary:
 genetic line  # replicates
 WT_non-transgenic  2
 RNAi_transgenic  4
Total hybridizations: 6
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE12314)

Series_summary:
Suppression of both endogenous storage proteins in soybean cotyledons was accomplished by RNAi. Microarray analysis was used to compare 3 samples, 1 nontransgenic control, 2 transgenic biological replicates.

Series_overall_design:
3 samples. Each sample had 2 technical replicates.
1. Control, nontransgenic
2. RNAi transgenic for storage protein suppression
3. Second RNAi transgenic for storage protein suppression, independent line from the first sample

PLEXdb Curator's Note:
The "biological replications" for the RNAi are not exactly biological replications; they are two different RNAi lines. Please note the technical replicates.
Publication: none
Created: 2009-06-08 13:11:58
Last Update: 2009-06-08 13:21:32
GEO Accession GSE12314
Submitter: PLEXdb Curator
Name: monica,,schmidt
Institution: Danforth Center, St.Louis, MO
Head of Laboratory: --
email(s):
Homepage:

 
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