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Expression data in response to abiotic stresses in tomato at flowering stage (Drought Stress)
Ashutosh Rai, Indian Institute of Vegetable Research, Department of Crop Improvment (ashutoshraiiivr@gmail.com,singhna@auburn.edu)
Experiment design (12 hybridizations)
genotype
•drought suseptible •drought resistant
stress condition
•control •water stressed

This experiment has been imported by PLEXdb from NCBI GEO (GSE22304) Series_summary: A comparative study was made to know the abiotic stress t...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Expression data in response to abiotic stresses in tomato at flowering stage (Drought Stress)
Accession No: LE12
Microarray: tomato10k
Visibility: public
Experiment Type:
Experiment Factor(s):
genotype
•drought suseptible   •drought resistant
stress condition
•control   •water stressed
Quality Control: biological replicates
Treatment summary:
 genotype  stress condition  # replicates
 drought suseptible  control  3
 drought suseptible  water stressed  3
 drought resistant  control  3
 drought resistant  water stressed  3
Total hybridizations: 12
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE22304)

Series_summary:
A comparative study was made to know the abiotic stress tolerance machanism between tolerant and susceptible plants at flowering stage.
The tolerance in response to abiotic stresses are sum of expression of thousands of genes at a particular stage.

Series_overall_design:
Tomato plants were exposed to drought and heat stress for RNA extraction and hybridization on Affymetrix microarrays. To study the molecular mechanism of abiotic stress tolerance to increase the tolerance in tomato plants, transcripts of tolerant and susceptible plants at flowering stage were compared in response to heat and water stress.

PLEXdb Curator's Note:
The original GEO submission GSE22304 has been separated into two different experiments at PLEXdb, LE12(Drought Stress) and LE13(Heat Stress). This is for the purpose of better accommodating the factorial structure.
Publication: none
Created: 2010-11-09 12:05:12
Last Update: 2010-11-09 12:25:04
Released: 2010-11-09
GEO Accession GSE22304
Submitter: PLEXdb Curator
Name: Ashutosh Rai
Institution: Indian Institute of Vegetable Research, Department of Crop Improvment
Head of Laboratory: Narendra K. Singh
email(s):
Homepage:

 
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