Search   for 
Find Your Gene ·  Publications ·  Tools ·  Gene List Suite ·  Expression Atlases ·  About PLEXdb ·  Feedback
Login ID:
Password:
Plants
Arabidopsis
Barley
Brachypodium
Citrus
Cotton
Grape
Maize
Medicago
Poplar
Rice
Soybean
Sugarcane
Tomato
Wheat
Pathogens & Symbionts
Search Experiments
Download Data
Gene List Suite
Tools
Your Account
Documentation
News
Personnel
Links
 Data Release Policy 
PLEXdb is committed to making expression data publicly available to researchers world-wide...
complete policy
 

Browse TomPLEX Experiment Data

Choose an experiment:
Microarray analysis of gene expression induced by Phytophthora infestans in tomato leaves
Muna Sultan, University of Bonn, Bonn, Germany (muna_soltan@yahoo.com)
Experiment design (7 hybridizations)
pathogen inoculation
•Healthy •Diseased

This experiment has been imported by PLEXdb from NCBI GEO (GSE33177)

Series_summary:
Phytophthora infestans is most notorious oomycet...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

Show
Experiment Name: Microarray analysis of gene expression induced by Phytophthora infestans in tomato leaves
Accession No: LE18
Microarray: tomato10k
Visibility: public
Experiment Type:
Experiment Factor(s):
pathogen inoculation
•Healthy   •Diseased
Quality Control: biological replicates
Treatment summary:
 pathogen inoculation  # replicates
 Healthy  3
 Diseased  4
Total hybridizations: 7
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE33177)

Series_summary:
Phytophthora infestans is most notorious oomycete causing a devastating disease on tomato called late blight. The molecular mechanisms involved in host-parasite interaction is still unexplored well. Investigation of changes in gene expression profile after pathogen infection to find out the mechanisms involved in infection process

Series_overall_design:
Second full expanded leaves from both healthy tomato plants (non-inoculated) and diseased tomato plants inoculated with Phytophthora infestans inoculum were used to extract total RNA for microarry analysis 12 hours post inoculation time.
Publication: none
Created: 2011-11-22 10:52:32
Last Update: 2011-12-01 09:32:49
Released: 2011-12-01
GEO Accession GSE33177
Submitter: PLEXdb Curator
Name: Muna Sultan
Institution: University of Bonn, Bonn, Germany
Head of Laboratory: Muna Sultan
email(s):
Homepage:

 
Copyright@2001-2013 The PLEXdb Group
All rights reserved.

For problems with the webpages contact PLEXdb webmasters