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Browse MedicagoPLEX Experiment Data

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Medicago truncatula germinated seedlings grown in Petri dishes for 3 days then carry out salt stress
Daofeng Li, State key Laboratory for Agricultural Biotechnology, College of Biological Sciences, China Agricultural University, Beijing, China (lidaof@gmail.com)
Experiment design (12 hybridizations)
time
•0 hrs •6 hrs •24 hrs •48 hrs

This experiment has been imported by PLEXdb from NCBI GEO (GSE13921)

Series_summary:
time-course salt stress experiment of model legu...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Medicago truncatula germinated seedlings grown in Petri dishes for 3 days then carry out salt stress
Accession No: ME6
Microarray: Medicago61k
Visibility: public
Experiment Type:
Experiment Factor(s):
time
•0 hrs  •6 hrs  •24 hrs  •48 hrs
Quality Control: biological replicates
Treatment summary:
 time  # replicates
 0 hrs  3
 6 hrs  3
 24 hrs  3
 48 hrs  3
Total hybridizations: 12
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE13921)

Series_summary:
time-course salt stress experiment of model legume Medicago truncatula roots using Affymetrix Medicago Array, aimed to dig some useful gene for improve salt resistance for legumes and other crops

Series_overall_design:
4 samples of Medicago truncatula germinated seedlings
grown in Petri dishes for 3 days
180mM NaCl salt stress
material collect at 0, 6, 24, 48 hour after salt stress beginning
3 biological replicates
2 ug of total RNA was used to synthesize doublestranded cDNA

PLEXdb Curator's Note:
GSE14029(MExx) is the super series that combines both GSE13921(MExx) and GSE13907(MExx).
This SuperSeries is composed of the following SubSeries:
GSE13907(MExx) Medicago truncatula seedlings grown two weeks in hydroponics media then carry out salt stress
GSE13921(MExx) Medicago truncatula germinated seedlings grown in Petri dishes for 3 days then carry out salt stress
GSE14029(MExx) Effects of salt stress on Medicago truncatula seedlings
Publication: 'An expression database for roots of the model legume Medicago truncatula under salt stress.', Li D, Su Z, Dong J, Wang T.
BMC Genomics 2009 Nov 11;10:517.
pubmed: 19906315
Created: 2011-05-24 10:53:27
Last Update: 2011-06-29 15:53:36
Released: 2011-06-29
GEO Accession GSE13921
Submitter: PLEXdb Curator
Name: Daofeng Li
Institution: State key Laboratory for Agricultural Biotechnology, College of Biological Sciences, China Agricultural University, Beijing, China
Head of Laboratory: Daofeng Li
email(s):
Homepage:

 
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