Search   for 
Find Your Gene ·  Publications ·  Tools ·  Gene List Suite ·  Expression Atlases ·  About PLEXdb ·  Feedback
Login ID:
Password:
Plants
Arabidopsis
Barley
Brachypodium
Citrus
Cotton
Grape
Maize
Medicago
Poplar
Rice
Soybean
Sugarcane
Tomato
Wheat
Pathogens & Symbionts
Search Experiments
Download Data
Gene List Suite
Tools
Your Account
Documentation
News
Personnel
Links
 Data Release Policy 
PLEXdb is committed to making expression data publicly available to researchers world-wide...
complete policy
 

Browse FusariumPLEX Experiment Data

Choose an experiment:
Gene expression during vegetative growth in complete liquid medium of Fusarium graminearum and Fusarium oxysporum and corresponding mutants in orthologous WOR1-like genes.(NineFungalArray_Fus_gra)
Wilfried Jonkers, University of Minnesota,USDA ARS, St. Paul (jonke007@umn.edu)
Experiment design (6 hybridizations)
species
•Fusarium graminearum •Fusarium oxysporum
genotype
•wild type •mutant

Note: NF6 and NF7 are an overlapping pair of experiments, originally submitted as one. PLEXdb has split it into two separate experiments approp...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

Show
Experiment Name: Gene expression during vegetative growth in complete liquid medium of Fusarium graminearum and Fusarium oxysporum and corresponding mutants in orthologous WOR1-like genes.(NineFungalArray_Fus_gra)
Accession No: NF6
Microarray: NineFungalArray_Fus_gra
Visibility: public
Experiment Type:
Experiment Factor(s):
species
•Fusarium graminearum   •Fusarium oxysporum
genotype
•wild type   •mutant
Quality Control: biological replicates
Treatment summary:
 species  genotype  # replicates
 Fusarium graminearum  wild type  3
 Fusarium graminearum  mutant  3
 Fusarium oxysporum  wild type  0
 Fusarium oxysporum  mutant  0
Total hybridizations: 6
Description: Note:
NF6 and NF7 are an overlapping pair of experiments, originally submitted as one. PLEXdb has split it into two separate experiments appropriate to the corresponding CDF file.
(curator:Fus_gra NF6, Fus_oxy NF7)

In order to study functional conservation of WOR1-like orthologs from two Fusarium species, gene expression of wild type and mutant strains deleted for the gene, were tested after 48 hours of growth in complete medium.
Publication: 'The Wor1-like protein Fgp1 regulates pathogenicity, toxin synthesis and reproduction in the phytopathogenic fungus Fusarium graminearum', Jonkers, W., Dong, Y., Broz, K., and Kistler, H.C.
PLoS Pathogens 8(5): e1002724.[2012]
pubmed: 22693448
Created: 2012-01-10 11:00:08
Last Update: 2012-02-10 10:29:06
Released: 2012-08-16
Submitter: Harold Corby Kistler
Name: Wilfried Jonkers
Institution: University of Minnesota,USDA ARS, St. Paul
Head of Laboratory: H. Corby Kistler
email(s):
Homepage:

 
Copyright@2001-2013 The PLEXdb Group
All rights reserved.

For problems with the webpages contact PLEXdb webmasters