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Browse RicePLEX Experiment Data

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Expression data from OsRP1L1-overexpressing plant leaf in japonica rice (cv. Ishikari-shiroge (I-S))
Xuming Wang, Zhejiang Academy of Agricultural Sciences, Institute of Virology and Biotechnology, Hangzhou, China (wangxuming@gmail.com)
Experiment design (6 hybridizations)
genotype
•OsRP1L1 overexpressing •Wild type

This experiment has been imported by PLEXdb from NCBI GEO (GSE39767)

Series_summary:
A novel rice NBS-LRR gene was cloned and overexp...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Expression data from OsRP1L1-overexpressing plant leaf in japonica rice (cv. Ishikari-shiroge (I-S))
Accession No: OS100
Microarray: Rice57k
Visibility: public
Experiment Type:
Experiment Factor(s):
genotype
•OsRP1L1 overexpressing   •Wild type
Quality Control: biological replicates
Treatment summary:
 genotype  # replicates
 OsRP1L1 overexpressing  3
 Wild type  3
Total hybridizations: 6
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE39767)

Series_summary:
A novel rice NBS-LRR gene was cloned and overexpressed to explore its function in bacterial blight (BB) resistance. Due to its similarity to the Rp1 gene in maize (Zea mays), it was designated as OsRP1L1. We used microarrays to detail the global reprogram of gene expression in OsRP1L1-overexpressing plants.

Series_overall_design:
To find out pathways and genes related to this defense-related gene, microanalysis were carried out on OsPR1L1-overexpressing plants. Three independent replicates were perfomed for overexpressing plants and wild type plants.
Publication: none
Created: 2012-09-28 13:46:16
Last Update: 2012-09-28 16:29:15
Released: 2012-10-03
GEO Accession GSE39767
Submitter: PLEXdb Curator
Name: Xuming Wang
Institution: Zhejiang Academy of Agricultural Sciences, Institute of Virology and Biotechnology, Hangzhou, China
Head of Laboratory: Jianping Chen
email(s):
Homepage:

 
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