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Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
Li,,Qun, Institute of plant physiology & ecology, SIBS, CAS, Shanghai, China (liq@sippe.ac.cn)
Experiment design (6 hybridizations)
genotype
•Zhonghua11(wildtype) •gif1(mutant)

This experiment has been imported by PLEXdb from NCBI GEO (GSE9498)

Series_summary:
To reveal the underlying molecular mechanism of G...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Global gene expression profiles of Oryza sativa wild type Zhonghua11 and mutant gif1 in filling stage
Accession No: OS17
Microarray: Rice57k
Visibility: public
Experiment Type:
Experiment Factor(s):
genotype
•Zhonghua11(wildtype)   •gif1(mutant)
Quality Control: biological replicates
Treatment summary:
 genotype  # replicates
 Zhonghua11(wildtype)  3
 gif1(mutant)  3
Total hybridizations: 6
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE9498)

Series_summary:
To reveal the underlying molecular mechanism of Gif1 action in the control of grain filling and yield improvement, we performed transcriptional profiling of wild type Zhonghua11 and mutant gif1 plants in early filling stage on a global scale using the Affymetrix GeneChip Rice Genome Array

Keywords: Filling stage

Series_overall_design:
Rice caryopsis were harvested in 7 days after flowering and three biological repeats were performed on Zhonghua11 (wild-type) and gif1 (mutant), respectively.
Publication: 'Control of rice grain-filling and yield by a gene with a potential signature of domestication.', Wang E, Wang J, Zhu X, Hao W et al.
Nat Genet 2008 Nov;40(11):1370-4
pubmed: 18820698
Created: 2009-05-15 13:16:22
Last Update: 2009-05-15 13:26:49
GEO Accession GSE9498
Submitter: PLEXdb Curator
Name: Li,,Qun
Institution: Institute of plant physiology & ecology, SIBS, CAS, Shanghai, China
Head of Laboratory: --
email(s):
Homepage:

 
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