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Browse RicePLEX Experiment Data

Choose an experiment:
Transcriptome analysis of gibberellin-signaling mutants in rice
Hitoshi,,Sakakibara, RIKEN, Yokohama, Japan (sakaki@riken.jp)
Experiment design (12 hybridizations)
genetic line
•Taichung 65 •gid1-3 •gid2-1 •slr1(k1001)

This experiment has been imported by PLEXdb from NCBI GEO (GSE15046)

Series_summary: This Series is composed of the following Samples: ...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Transcriptome analysis of gibberellin-signaling mutants in rice
Accession No: OS23
Microarray: Rice57k
Visibility: public
Experiment Type:
Experiment Factor(s):
genetic line
•Taichung 65   •gid1-3   •gid2-1   •slr1(k1001)
Quality Control: biological replicates
Treatment summary:
 genetic line  # replicates
 Taichung 65  3
 gid1-3  3
 gid2-1  3
 slr1(k1001)  3
Total hybridizations: 12
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE15046)

Series_summary:
This Series is composed of the following Samples:
GSM375647: Taichung 65_shoot_replicate 1
GSM375648: Taichung 65_shoot_replicate 2
GSM375649: Taichung 65_shoot_replicate 3
GSM375765: gid1-3_ shoot_replicate 1
GSM375766: gid1-3_ shoot_replicate 2
GSM375767: gid1-3_ shoot_replicate 3
GSM375769: gid2-1_ shoot_replicate 1
GSM375770: gid2-1_ shoot_replicate 2
GSM375772: gid2-1_ shoot_replicate 3
GSM375773: slr1 (k1001)_ shoot_replicate 1
GSM375775: slr1 (k1001)_ shoot_replicate 2
GSM375777: slr1 (k1001)_ shoot_replicate 3

Series_overall_design:
12 samples were used in this experiment
Publication: 'Highly sensitive and high-throughput analysis of plant hormones using MS-probe modification and liquid chromatography-tandem mass spectrometry: an application for hormone profiling in Oryza sativa', Kojima M, Kamada-Nobusada T, Komatsu H, Takei K et al
Plant Cell Physiol 2009 Apr 20
pubmed: 19369275
Created: 2009-05-22 09:19:22
Last Update: 2009-05-22 09:39:06
GEO Accession GSE15046
Submitter: PLEXdb Curator
Name: Hitoshi,,Sakakibara
Institution: RIKEN, Yokohama, Japan
Head of Laboratory: --
email(s):
Homepage:

 
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