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Browse RicePLEX Experiment Data

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Whole-Genome Analysis of SSB Larvae Infestation Regulated Rice Genes
Guoxin Zhou, Zhejiang University, Institute of Insect Science, Hangzhou, China (microarray211@126.com)
Experiment design (3 hybridizations)
insect infestation
•control •SSB infested

This experiment has been imported by PLEXdb from NCBI GEO (GSE28012)

Series_summary:
Rice, the world’s most important food crop, is...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Whole-Genome Analysis of SSB Larvae Infestation Regulated Rice Genes
Accession No: OS65
Microarray: Rice57k
Visibility: public
Experiment Type:
Experiment Factor(s):
insect infestation
•control   •SSB infested
Quality Control: biological replicates
Treatment summary:
 insect infestation  # replicates
 control  1
 SSB infested  2
Total hybridizations: 3
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE28012)

Series_summary:
Rice, the world’s most important food crop, is attacked by multiple herbivores and pathogens.the rice striped stem borer (SSB) Chilo suppressalis is one of another most important rice insect pests. Here, we use Affymetrix Whole-Genome rice arrays to detect SSB infestation responsive genes.

Series_overall_design:
RNA samples from five damaged stems of SSB-challenged 24 h rice plants or five stems from unchallenged plants (for control samples) were used to array analysis. Two replicate biological experiments of SSB treatment rice arrays and one control samples array were peformed.
Publication: none
Created: 2011-07-18 15:04:03
Last Update: 2011-07-18 19:20:55
Released: 2011-07-18
GEO Accession GSE28012
Submitter: PLEXdb Curator
Name: Guoxin Zhou
Institution: Zhejiang University, Institute of Insect Science, Hangzhou, China
Head of Laboratory: Guoxin Zhou
email(s):
Homepage:

 
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