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Browse RicePLEX Experiment Data

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Differential expression for rice-gall midge interaction
Nidhi Rawat, Directorate of Rice Research, Department of Entomology, Hyderabad, India (nidhi_rawat608@yahoo.co.in)
Experiment design (9 hybridizations)
insect infestation
•control •GMB1 •GMB4M

This experiment has been imported by PLEXdb from NCBI GEO (GSE22538)

Series_summary:
We exposed Kavya rice seedlings to different gal...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Differential expression for rice-gall midge interaction
Accession No: OS76
Microarray: Rice57k
Visibility: public
Experiment Type:
Experiment Factor(s):
insect infestation
•control   •GMB1   •GMB4M
Quality Control: biological replicates
Treatment summary:
 insect infestation  # replicates
 control  3
 GMB1  3
 GMB4M  3
Total hybridizations: 9
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE22538)

Series_summary:
We exposed Kavya rice seedlings to different gall midge biotypes, GMB1 and GMB4M, which exhibit incompatible and compatible interactions, respectively.

Series_overall_design:
Expression study in Kavya seedlings using pooled samples of stem meristematic tissues 24, 48, 96, and 120 hr after GMB1 and GMB4M infestation when compared with uninfested control. Three replicates each condition.
Publication: none
Created: 2011-12-08 11:23:05
Last Update: 2011-12-08 13:15:33
Released: 2011-12-08
GEO Accession GSE22538
Submitter: PLEXdb Curator
Name: Nidhi Rawat
Institution: Directorate of Rice Research, Department of Entomology, Hyderabad, India
Head of Laboratory: J. S. Bentur
email(s):
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