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Browse PoplarPLEX Experiment Data

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Gene expression response of Populus tremuloides cell suspension cultures to methyl jasmonate feeding
Chung-Jui Tsai, University of Georgia, Department of School of Forestry and Natural Resources, Athens, Georgia (cjtsai@uga.edu,sahardin@mtu.edu)
Experiment design (4 hybridizations)
compound
•methyl jasmonate •control

This experiment has been imported by PLEXdb from NCBI GEO (GSE16773) Series_summary: Gene expression response of Populus cell cultures subject...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Gene expression response of Populus tremuloides cell suspension cultures to methyl jasmonate feeding
Accession No: PT17
Microarray: Poplar61k
Visibility: public
Experiment Type:
Experiment Factor(s):
compound
•methyl jasmonate   •control
Quality Control: biological replicates
Treatment summary:
 compound  # replicates
 methyl jasmonate  2
 control  2
Total hybridizations: 4
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE16773)

Series_summary:
Gene expression response of Populus cell cultures subjected to methyl jasmonate feeding was analyzed using the Affymetrix poplar genome microarrays.

Keywords: Stress response

Series_overall_design:
Populus tremuloides suspension cells were treated with methyl jasmonate (MJ) in DMSO or with DMSO alone (C).  Cells were harvested after 48 hours.  Two biological replicates were obtained for each condition.

PLEXdb Curator's Note: This is part of the super series GSE16786 at GEO which contains the subseries PT15 (GSE16783), PT16 (GSE16785) and PT17 (GSE16773). GEO also mentions that PT5 (GSE14893) and PT3 (GSE14515) belong to this super series. We have not been able to import the superseries GSE16786 because it could not be accommodated with a meaningful factorial structure.
Publication: none
Created: 2010-12-17 11:18:59
Last Update: 2010-12-17 11:30:44
Released: 2011-01-25
GEO Accession GSE16773
Submitter: PLEXdb Curator
Name: Chung-Jui Tsai
Institution: University of Georgia, Department of School of Forestry and Natural Resources, Athens, Georgia
Head of Laboratory: Scott A. Harding
email(s):
Homepage:

 
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