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Browse PoplarPLEX Experiment Data

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Characterization of Populus Class III HDZIPs
Andrew Groover, USDA Forest Service, Institute of Forest Genetics Department, Davis, California (agroover@fs.fed.us)
Experiment design (12 hybridizations)
genotype
•HBMut2-4-1 •HBMut3-8-1 •wildtype

This experiment has been imported by PLEXdb from NCBI GEO (GSE19467) Series_summary: Comparison of wild type Populus to transgenics expressing ...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Characterization of Populus Class III HDZIPs
Accession No: PT19
Microarray: Poplar61k
Visibility: public
Experiment Type:
Experiment Factor(s):
genotype
•HBMut2-4-1   •HBMut3-8-1   •wildtype
Quality Control: biological replicates
Treatment summary:
 genotype  # replicates
 HBMut2-4-1  4
 HBMut3-8-1  4
 wildtype  4
Total hybridizations: 12
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE19467)

Series_summary:
Comparison of wild type Populus to transgenics expressing either a miRNA-resistant Populus ortholog of ATHB15/CORONA or miRNA-resistant Populus ortholog of REVOLUTA

Series_overall_design:
RNA was extracted from stem tissue of four biological replicates each for two mutants and wild type controls. Mutants were lines HBMut2-4-1 (Populus ATHB15/CAN ortholog) and HBMut3-8-1 (Populus REVOLUTA ortholog).
Publication: none
Created: 2010-12-17 12:14:50
Last Update: 2010-12-17 12:32:37
Released: 2011-02-07
GEO Accession GSE19467
Submitter: PLEXdb Curator
Name: Andrew Groover
Institution: USDA Forest Service, Institute of Forest Genetics Department, Davis, California
Head of Laboratory: Andrew Groover
email(s):
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