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Browse PoplarPLEX Experiment Data

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Isolation of poplar genes involved in xylem vessel differentiation
Misato Ohtani, RIKEN, Department of Biomass Engineering Program, Yokohama, Japan (misato@psc.riken.jp)
Experiment design (6 hybridizations)
compound
•mock •DEX

This experiment has been imported by PLEXdb from NCBI GEO (GSE25304)

Series_summary:
Downstream genes of PtVNS genes were explored wi...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Isolation of poplar genes involved in xylem vessel differentiation
Accession No: PT31
Microarray: Poplar61k
Visibility: public
Experiment Type:
Experiment Factor(s):
compound
•mock   •DEX
Quality Control: biological replicates
Treatment summary:
 compound  # replicates
 mock  3
 DEX  3
Total hybridizations: 6
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE25304)

Series_summary:
Downstream genes of PtVNS genes were explored with inducible expression system using glucocorticoid receptor (GR). Transgenic poplar plants expressing 35S:AtVND7-VP16-GR were treated with dexamethazone (DEX). A number of genes related to the formation of xylem vessels were induced by DEX.

Series_overall_design:
Total RNAs of the transgenic plants carrying 35S:AtVND7-VP16-GR treated with and without DEX were compared.
Publication: none
Created: 2011-07-29 10:23:09
Last Update: 2011-07-29 13:24:22
Released: 2011-07-29
GEO Accession GSE25304
Submitter: PLEXdb Curator
Name: Misato Ohtani
Institution: RIKEN, Department of Biomass Engineering Program, Yokohama, Japan
Head of Laboratory: Taku Demura
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