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Browse PoplarPLEX Experiment Data

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Comparison of male and female floral organs
Joshua Adams, University of Arkansas-Monticello, Department of Forest Resources, Monticello, Arkansas (AdamsJ@uamont.edu)
Experiment design (10 hybridizations)
organism part name
•Male Bud •Female bud

This experiment has been imported by PLEXdb from NCBI GEO (GSE29336)

Series_summary:
We conducted micro-array analysis to quantify th...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Comparison of male and female floral organs
Accession No: PT39
Microarray: Poplar61k
Visibility: public
Experiment Type:
Experiment Factor(s):
organism part name
•Male Bud   •Female bud
Quality Control: biological replicates
Treatment summary:
 organism part name  # replicates
 Male Bud  5
 Female bud  5
Total hybridizations: 10
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE29336)

Series_summary:
We conducted micro-array analysis to quantify the global transcriptome variations in floral organs of a male and female tree allowing for identification of sex-linked transcripts. We used RNA samples from male floral buds in August and female floral buds in Spetemeber. Bud scale were removed. While the sampling time differed, the developmental stage of the floral organs was similar between the male and female.

Series_overall_design:
Five independent samples of floral bud tissues with bud scales removes were collected from the upper crown of a sexually mature male tree and female tree. RNA was extracted from tissues and hybridized on Affymetrix Genechip Poplar Genome Array.
Publication: none
Created: 2012-03-08 09:44:22
Last Update: 2012-03-08 14:09:04
Released: 0000-00-00
GEO Accession GSE29336
Submitter: PLEXdb Curator
Name: Joshua Adams
Institution: University of Arkansas-Monticello, Department of Forest Resources, Monticello, Arkansas
Head of Laboratory: Joshua Adams
email(s):
Homepage:

 
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