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Browse PoplarPLEX Experiment Data

Choose an experiment:
CO1 network analysis in poplar
Joshua Adams, University of Arkansas-Monticello, Department of Forest Resources, Monticello, Arkansas (AdamsJ@uamont.edu)
Experiment design (8 hybridizations)
genetic line
•overexpression CO1 •empty vec control C01

This experiment has been imported by PLEXdb from NCBI GEO (GSE28689)

Series_summary:
We conducted microarray experiments by comparing...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: CO1 network analysis in poplar
Accession No: PT40
Microarray: Poplar61k
Visibility: public
Experiment Type:
Experiment Factor(s):
genetic line
•overexpression CO1   •empty vec control C01
Quality Control: biological replicates
Treatment summary:
 genetic line  # replicates
 overexpression CO1  4
 empty vec control C01  4
Total hybridizations: 8
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE28689)

Series_summary:
We conducted microarray experiments by comparing constitutive constructs with appropriate controls, followed by the identification of downstream targets of Pro35S:CO1

Series_overall_design:
Four samples of mature leaf tissues were collected from four independent lines of 35S:CO1 and pBI101. RNA was extracted from tissues and hybridized on Affymetrix Genechip Poplar Genome Array.


PLEXdb Curator's note:
PT40(GSE28689), PT41(GSE28693) and PT42(GSE28706) are related experiments. GSE28689 and GSE28693 have been combined into a super series, PT42(GSE28706, CO1 and CO2 network analysis in poplar) at GEO.
Publication: none
Created: 2012-03-08 10:04:44
Last Update: 2012-03-08 15:36:10
Released: 0000-00-00
GEO Accession GSE28689
Submitter: PLEXdb Curator
Name: Joshua Adams
Institution: University of Arkansas-Monticello, Department of Forest Resources, Monticello, Arkansas
Head of Laboratory: Cetin Yuceer
email(s):
Homepage:

 
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