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Browse PoplarPLEX Experiment Data

Choose an experiment:
Comparative transcriptomics analysis of Populus leaves under nitrogen limitation
Chung-Jui,,Tsai, University of Georgia, Athens, Georgia (cjtsai@uga.edu)
Experiment design (24 hybridizations)
line
•clone1979 •clone3200
developmental stage name
•young(LPI2) •mature(LPI5)
stress condition
•5 mM (N+) •0.125 mM (N-)
treatment
•4weeks •8weeks

This experiment has been imported by PLEXdb from NCBI GEO (GSE14894)

Series_summary: This SuperSeries is composed of the following subs...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Comparative transcriptomics analysis of Populus leaves under nitrogen limitation
Accession No: PT6
Microarray: Poplar61k
Visibility: public
Experiment Type:
Experiment Factor(s):
line
•clone1979   •clone3200
developmental stage name
•young(LPI2)   •mature(LPI5)
stress condition
•5 mM (N+)   •0.125 mM (N-)
treatment
•4weeks   •8weeks
Quality Control: biological replicates
Treatment summary:
 line  developmental stage name  stress condition  treatment  # replicates
 clone1979  young(LPI2)  5 mM (N+)  4weeks  2
 clone1979  young(LPI2)  5 mM (N+)  8weeks  0
 clone1979  young(LPI2)  0.125 mM (N-)  4weeks  2
 clone1979  young(LPI2)  0.125 mM (N-)  8weeks  0
 clone1979  mature(LPI5)  5 mM (N+)  4weeks  2
 clone1979  mature(LPI5)  5 mM (N+)  8weeks  2
 clone1979  mature(LPI5)  0.125 mM (N-)  4weeks  2
 clone1979  mature(LPI5)  0.125 mM (N-)  8weeks  2
 clone3200  young(LPI2)  5 mM (N+)  4weeks  2
 clone3200  young(LPI2)  5 mM (N+)  8weeks  0
 clone3200  young(LPI2)  0.125 mM (N-)  4weeks  2
 clone3200  young(LPI2)  0.125 mM (N-)  8weeks  0
 clone3200  mature(LPI5)  5 mM (N+)  4weeks  2
 clone3200  mature(LPI5)  5 mM (N+)  8weeks  2
 clone3200  mature(LPI5)  0.125 mM (N-)  4weeks  2
 clone3200  mature(LPI5)  0.125 mM (N-)  8weeks  2
Total hybridizations: 24
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE14894)

Series_summary:
This SuperSeries is composed of the following subset Series:
GSE14515: Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979

GSE14893: Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200

Series_overall_design:
Refer to individual Series

PLEXdb Curator's Note:

Series GSE14515(PT3) and GSE14893(PT5) are part of the SuperSeries GSE14894(PT6).
Publication: none
Created: 2009-07-08 11:35:21
Last Update: 2009-07-08 11:55:36
GEO Accession GSE14894
Submitter: PLEXdb Curator
Name: Chung-Jui,,Tsai
Institution: University of Georgia, Athens, Georgia
Head of Laboratory: --
email(s):
Homepage:

 
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