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Browse WheatPLEX Experiment Data

Choose an experiment:
Wheat Yr39 and yr39 (Alpowa) genotypes treated with P.s. tritici PST-78
Tristan Coram, USDA-ARS (tcoram@mail.wsu.edu)
Experiment design (36 hybridizations)
genotype
•Yr39 •yr39
time
•12 hpi •24 hpi •48 hpi
Treated or untreated
•P. s. tritici-inoculated •Mock-inoculated

Comparison of 2 P. s. tritici-inoculated and mock-inoculated genotypes that differ for the Yr39 high-temperature adult-plant resistance phenotype o...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Wheat Yr39 and yr39 (Alpowa) genotypes treated with P.s. tritici PST-78
Accession No: TA11
Microarray: Wheat
Visibility: public
Experiment Type:
Experiment Factor(s):
genotype
•Yr39  •yr39
time
•12 hpi  •24 hpi  •48 hpi
Treated or untreated
•P. s. tritici-inoculated  •Mock-inoculated
Quality Control: biological replicates
Treatment summary:
 genotype  time  Treated or untreated  # replicates
 Yr39  12 hpi  P. s. tritici-inoculated  3
 Yr39  12 hpi  Mock-inoculated  3
 Yr39  24 hpi  P. s. tritici-inoculated  3
 Yr39  24 hpi  Mock-inoculated  3
 Yr39  48 hpi  P. s. tritici-inoculated  3
 Yr39  48 hpi  Mock-inoculated  3
 yr39  12 hpi  P. s. tritici-inoculated  3
 yr39  12 hpi  Mock-inoculated  3
 yr39  24 hpi  P. s. tritici-inoculated  3
 yr39  24 hpi  Mock-inoculated  3
 yr39  48 hpi  P. s. tritici-inoculated  3
 yr39  48 hpi  Mock-inoculated  3
Total hybridizations: 36
Description: Comparison of 2 P. s. tritici-inoculated and mock-inoculated genotypes that differ for the Yr39 high-temperature adult-plant resistance phenotype over a time course (12, 24, 48h)

Submitted at NCBI GEO via PLEXdb.

Publication: 'Transcriptome analysis of high-temperature adult-plant resistance conditioned by Yr39 during the wheat–Puccinia striiformis f. sp. tritici interaction', Tristan E Coram, Matthew L. Settles and Xianming Chen
MOLECULAR PLANT PATHOLOGY (2008) 9(4), 479-493
pubmed: 18705862
Created: 2007-10-04 15:05:42
Last Update: 2008-08-05 12:18:13
GEO Accession GSE31756
Submitter: Tristan E Coram
Name: Tristan Coram
Institution: USDA-ARS
Head of Laboratory: Xianming Chen
email(s):
Homepage:

 
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