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Browse WheatPLEX Experiment Data

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Wheat Yr5 isolines treated with P.s. tritici PST-100 (06-194)
Tristan Coram, USDA-ARS (tcoram@mail.wsu.edu)
Experiment design (48 hybridizations)
genotype
•Yr5 isoline •yr5 isoline
time
•06h •12h •24h •48h
Treated or untreated
•P. s. tritici-inoculated •Mock-inoculated

Comparison of 2 P. s. tritici-inoculated and mock-inoculated isolines that differ for the putative Yr5 resistance gene over a time course (6, 12, 2...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Wheat Yr5 isolines treated with P.s. tritici PST-100 (06-194)
Accession No: TA9
Microarray: Wheat
Visibility: public
Experiment Type:
Experiment Factor(s):
genotype
•Yr5 isoline  •yr5 isoline
time
•06h  •12h  •24h  •48h
Treated or untreated
•P. s. tritici-inoculated  •Mock-inoculated
Quality Control: biological replicates
Treatment summary:
 genotype  time  Treated or untreated  # replicates
 Yr5 isoline  06h  P. s. tritici-inoculated  3
 Yr5 isoline  06h  Mock-inoculated  3
 Yr5 isoline  12h  P. s. tritici-inoculated  3
 Yr5 isoline  12h  Mock-inoculated  3
 Yr5 isoline  24h  P. s. tritici-inoculated  3
 Yr5 isoline  24h  Mock-inoculated  3
 Yr5 isoline  48h  P. s. tritici-inoculated  3
 Yr5 isoline  48h  Mock-inoculated  3
 yr5 isoline  06h  P. s. tritici-inoculated  3
 yr5 isoline  06h  Mock-inoculated  3
 yr5 isoline  12h  P. s. tritici-inoculated  3
 yr5 isoline  12h  Mock-inoculated  3
 yr5 isoline  24h  P. s. tritici-inoculated  3
 yr5 isoline  24h  Mock-inoculated  3
 yr5 isoline  48h  P. s. tritici-inoculated  3
 yr5 isoline  48h  Mock-inoculated  3
Total hybridizations: 48
Description: Comparison of 2 P. s. tritici-inoculated and mock-inoculated isolines that differ for the putative Yr5 resistance gene over a time course (6, 12, 24, 48h)

Submitted at NCBI GEO via PLEXdb.

Publication: 'Transcriptome analysis of the wheat-Puccinia striiformis f. sp. tritici interaction', TRISTAN E. CORAM, MEINAN WANG AND XIANMING CHEN
MOLECULAR PLANT PATHOLOGY 9 (2): 157-169 (2008).
pubmed: 18705849
Created: 2007-02-13 11:12:21
Last Update: 2008-08-05 12:21:27
GEO Accession GSE31753
Submitter: Tristan E Coram
Name: Tristan Coram
Institution: USDA-ARS
Head of Laboratory: Xianming Chen
email(s):
Homepage:

 
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