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Browse GrapePLEX Experiment Data

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Rootstock and soil effects on grape transcriptome
Alessio Aprile, University of Salento (alessio.aprile@libero.it)
Experiment design (18 hybridizations)
treatment1
•Turf •Sand •Asti soil
treatment2
•101-14 rootstock •1103-P rootstock

Soil qualities and rootstocks are among the main factors that have been acknowledged to influence grape development as well as fruit and wine compo...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Rootstock and soil effects on grape transcriptome
Accession No: VV41
Microarray: Grape
Visibility: public
Experiment Type:
Experiment Factor(s):
treatment1
•Turf   •Sand   •Asti soil
treatment2
•101-14 rootstock   •1103-P rootstock
Quality Control: biological replicates
Treatment summary:
 treatment1  treatment2  # replicates
 Turf  101-14 rootstock  3
 Turf  1103-P rootstock  3
 Sand  101-14 rootstock  3
 Sand  1103-P rootstock  3
 Asti soil  101-14 rootstock  3
 Asti soil  1103-P rootstock  3
Total hybridizations: 18
Description: Soil qualities and rootstocks are among the main factors that have been acknowledged to influence grape development as well as fruit and wine composition. Despite the role of the soil and rootstock in establishing a successful vineyard in terms of grape quality, almost no molecular evidence linking soil and rootstock properties to the gene expression have been reported. The transcriptome variation in response to different soils and rootstocks was investigated through microarray technology. The cv. Pinot Noir was grown on different soils: sand, turf and vineyard soil. The plants were grafted on the contrasting 101-14 and 1103 Paulsen rootstocks. The modulation of genes expression in response to
different soils and rootstocks was evaluated considering their potential impact on primary
(carbohydrate) and secondary (phenylpropanoid) metabolisms.

Submitted at NCBI GEO via PLEXdb.



Publication:
C Mar, A Aprile, E Roncaglia, E Tocci, LG Corino, L De Bellis, L Cattivelli. 2013. "Rootstock and soil induce transcriptome modulation of phenylpropanoid pathway in grape leaves". Journal of Plant Interactions, 1-16.
Publication: none
Created: 2012-10-22 09:44:46
Last Update: 2012-10-25 11:37:32
Released: 2014-01-03
GEO Accession GSE42315
Submitter: alessio aprile
Name: Alessio Aprile
Institution: University of Salento
Head of Laboratory: Luigi Cattivelli
email(s):
Homepage:

 
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