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Browse GrapePLEX Experiment Data

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Grapevine cell cultures transcriptomic response to methyl jasmonate and cyclodextrin elicitors
Pablo Carbonell-Bejerano, Instituto de Biología Agrícola de Mendoza (CONICET-Universidad Nacional de Cuyo) (pablo.carbonell@icvv.es)
Experiment design (24 hybridizations)
treatment
•Control •MJ •CD •MJ+CD
time
•0 hrs •24 hrs

The specificity and synergisms of methyl jasmonate and cyclodextrin elicitor effects in grapevine were analysed at the transcrptomic level. To this...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Grapevine cell cultures transcriptomic response to methyl jasmonate and cyclodextrin elicitors
Accession No: VV44
Microarray: GrapeGen
Visibility: public
Experiment Type:
Experiment Factor(s):
treatment
•Control   •MJ   •CD   •MJ+CD
time
•0 hrs  •24 hrs
Quality Control: biological replicates
Treatment summary:
 treatment  time  # replicates
 Control  0 hrs  3
 Control  24 hrs  3
 MJ  0 hrs  3
 MJ  24 hrs  3
 CD  0 hrs  3
 CD  24 hrs  3
 MJ+CD  0 hrs  3
 MJ+CD  24 hrs  3
Total hybridizations: 24
Description: The specificity and synergisms of methyl jasmonate and cyclodextrin elicitor effects in grapevine were analysed at the transcrptomic level. To this end, 12-14 day old cell cultures established from Vitis vinifera L. cv Monastrell calli were elicited with 50 mM cyclodextrin (CD), 100 µM methyl jasmonate (MJ) or the combination of both elicitros (MJ+CD). The experiment was carried out in triplicate and untreated cell cultures were followed in parallel as a control. Cells of each culture were isolated just prior and 24h after the treatment to obtain RNA. GrapeGen GeneChip microarray hybridization was performed from each sample.

Submitted at NCBI GEO via PLEXdb.

Publication: none
Created: 2012-11-09 04:56:01
Last Update: 2012-11-09 19:50:56
GEO Accession GSE42312
Submitter: Pablo Carbonell-Bejerano
Name: Pablo Carbonell-Bejerano
Institution: Instituto de Biología Agrícola de Mendoza (CONICET-Universidad Nacional de Cuyo)
Head of Laboratory: Diego Lijavetzky
email(s):
Homepage:

 
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