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Browse MaizePLEX Experiment Data

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Gene expression variation among eight maize inbreds
Robert,M,Stupar, University of Minnesota, Saint Paul, Minnesota (stup0004@umn.edu)
Experiment design (24 hybridizations)
genetic line
•B37 •B73 •B84 •Mo17 •Oh43 •B14a •W22 •Wf9

This experiment has been imported by PLEXdb from NCBI GEO (GSE10237)

Series_summary:
Expression profiling analyses for eight maize in...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Gene expression variation among eight maize inbreds
Accession No: ZM22
Microarray: maize18k
Visibility: public
Experiment Type:
Experiment Factor(s):
genetic line
•B37   •B73   •B84   •Mo17   •Oh43   •B14a   •W22   •Wf9
Quality Control: biological replicates
Treatment summary:
 genetic line  # replicates
 B37  3
 B73  3
 B84  3
 Mo17  3
 Oh43  3
 B14a  3
 W22  3
 Wf9  3
Total hybridizations: 24
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE10237)

Series_summary:
Expression profiling analyses for eight maize inbreds reveals extensive transcriptional variation. Many genes exhibit presence-absence variation among the inbred lines.

Keywords: Genotype comparison series

Series_overall_design:
Affymetrix expression profiling was used to study gene expression in aerial tissue from 11-day seedlings of maize. Three biological replicates were performed for eight different inbred lines; B37, B73, B84, Mo17, Oh43, B14a, Wf9 and W22.
Publication: none
Created: 2009-04-30 12:34:34
Last Update: 2009-04-30 12:58:12
GEO Accession GSE10237
Submitter: PLEXdb Curator
Name: Robert,M,Stupar
Institution: University of Minnesota, Saint Paul, Minnesota
Head of Laboratory: --
email(s):
Homepage:

 
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