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Browse MaizePLEX Experiment Data

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Sporisorium reilianum Infection Changes Inflorescence and Branching Architectures of Maize
Hassan Abdelalim Ghareeb, Göttingen University, Albrecht von Haller Institute, Göttingen, Germany (Hassan.Ghareeb@biologie.uni-goettingen.de)
Experiment design (6 hybridizations)
pathogen inoculation
•infected •mock

This experiment has been imported by PLEXdb from NCBI GEO (GSE29747)

Series_summary:
S. reilianum triggered loss of organ and meriste...[complete overview]

Experiment     Expression     Hybridizations & Samples     Quality Control     Compare Treatments     Downloads    

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Experiment Name: Sporisorium reilianum Infection Changes Inflorescence and Branching Architectures of Maize
Accession No: ZM49
Microarray: maize18k
Visibility: public
Experiment Type:
Experiment Factor(s):
pathogen inoculation
•infected   •mock
Quality Control: biological replicates
Treatment summary:
 pathogen inoculation  # replicates
 infected  3
 mock  3
Total hybridizations: 6
Description: This experiment has been imported by PLEXdb from NCBI GEO (GSE29747)

Series_summary:
S. reilianum triggered loss of organ and meristem identity, and loss of meristem determinacy in male and female inflorescences and flowers. Microarray analysis showed that these developmental changes were accompanied with transcriptional regulation of genes proposed to regulate floral organ and meristem identity, and meristem determinacy in maize.

Series_overall_design:
Infected ears were compared with mock infected ears. Each treatment had 3 biological replicates
Disease: S. reilianum-infected ears with elongated kernel: Zm_Sr5_15_2_Leafy ears4weeks_I, Zm_Sr5_15_2_Leafy ears4weeks_II, Zm_Sr5_15_2_Leafy ears4weeks_III
Disease: Mock infected ears at: Zm_Sr5_15_2_Mock4weeks_I, Zm_Sr5_15_2_Mock4weeks_II, Zm_Sr5_15_2_Mock4weeks_III
biological replicate: Zm_Sr5_15_2_Leafy ears4weeks_I, Zm_Sr5_15_2_Leafy ears4weeks_II, Zm_Sr5_15_2_Leafy ears4weeks_III
biological replicate: Zm_Sr5_15_2_Mock4weeks_I, Zm_Sr5_15_2_Mock4weeks_II, Zm_Sr5_15_2_Mock4weeks_III
Publication: none
Created: 2011-10-18 11:58:05
Last Update: 2011-10-20 15:19:36
Released: 2011-10-20
GEO Accession GSE29747
Submitter: PLEXdb Curator
Name: Hassan Abdelalim Ghareeb
Institution: Göttingen University, Albrecht von Haller Institute, Göttingen, Germany
Head of Laboratory: Jan Schirawski
email(s):
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