Search   for 
Find Your Gene ·  Publications ·  Tools ·  Gene List Suite ·  Expression Atlases ·  About PLEXdb ·  Feedback
Login ID:
Password:
Create a new account
Plants
Arabidopsis
Barley
Brachypodium
Citrus
Cotton
Grape
Maize
Medicago
Poplar
Rice
Soybean
Sugarcane
Tomato
Wheat
Pathogens & Symbionts
Submit Experiment Data
Search Experiments
Download Data
Gene List Suite
Tools
Your Account
Documentation
News
Links
Miscellaneous
 Data Release Policy 
PLEXdb is committed to making expression data publicly available to researchers world-wide...
complete policy
 

Experiment Search Results
Poplar61k
1/48 Experiment PT49 Affymetrix data from Populus nectaries versus leaves
Submitter: PLEXdb Curator
Head of Lab: Peter Ache
Experiment Factors: organism part name
GeneChip Type: Poplar61k
Experiment design (6 hybridizations)
organism part name
•leaf •nectary

2/48 Experiment PT48 Transcript expression data from Populus euphratica leaves subjected to drought
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: water stress
GeneChip Type: Poplar61k
Experiment design (10 hybridizations)
water stress
•Watering 100% •Watering 70% •Watering 50% •Watering 20% •Watering 5%

3/48 Experiment PT47 Transcript expression data from Populus euphratica leaves subjected to infection by Marssonina pathogen
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: time
GeneChip Type: Poplar61k
Experiment design (6 hybridizations)
time
•0 dai •2 dai •7 dai

4/48 Experiment PT46 Transcriptome profiling data for secondary vascular tissue regeneration in Populus tomentosa
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: developmental stage name
GeneChip Type: Poplar61k
Experiment design (10 hybridizations)
developmental stage name
•diX •deX •rPh •diC •rC

5/48 Experiment PT45 Identification of Developing Xylem-Specific Promoters from Poplar by Using tissue type-Specific Whole Genome Transcriptome Analysis.
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: tissue type name
GeneChip Type: Poplar61k
Experiment design (16 hybridizations)
tissue type name
•Bark and Mature Phloem •Cambium •Developing Phloem •Developing Xylem •Mature Leaf •Mature Xylem •Shoot and Leaf Primordia •Whole Stem

6/48 Experiment PT44 affy_popsec_nancy_stomata_poplar -Molecular bases of acclimation and adaptation to water deficit in poplar
Submitter: PLEXdb Curator
Head of Lab: Claire Lurin
Experiment Factors: genotype, water stress
GeneChip Type: Poplar61k
Experiment design (16 hybridizations)
genotype
•Carpaccio •Soligo
water stress
•control •early-drought stress •mild water deficit •moderate water deficit

7/48 Experiment PT43 Expression data from one-year-old leaves of Populus simonii treated with short-term water deficit
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: water stress
GeneChip Type: Poplar61k
Experiment design (4 hybridizations)
water stress
•water deficit •control

8/48 Experiment PT42 CO1 and CO2 network analysis in poplar
Submitter: PLEXdb Curator
Head of Lab: Cetin Yuceer
Experiment Factors: genetic line
GeneChip Type: Poplar61k
Experiment design (16 hybridizations)
genetic line
•overexpression CO1 •empty vec contol CO1 •overexpression CO2 •empty vec control CO2

9/48 Experiment PT41 CO2 network analysis in poplar
Submitter: PLEXdb Curator
Head of Lab: Cetin Yuceer
Experiment Factors: genetic line
GeneChip Type: Poplar61k
Experiment design (8 hybridizations)
genetic line
•overexpression CO2 •empty vec control CO2

10/48 Experiment PT40 CO1 network analysis in poplar
Submitter: PLEXdb Curator
Head of Lab: Cetin Yuceer
Experiment Factors: genetic line
GeneChip Type: Poplar61k
Experiment design (8 hybridizations)
genetic line
•overexpression CO1 •empty vec control C01

11/48 Experiment PT39 Comparison of male and female floral organs
Submitter: PLEXdb Curator
Head of Lab: Joshua Adams
Experiment Factors: organism part name
GeneChip Type: Poplar61k
Experiment design (10 hybridizations)
organism part name
•Male Bud •Female bud

12/48 Experiment PT38 Time-course bud expression data from Populus deltoides
Submitter: PLEXdb Curator
Head of Lab: Joshua Adams
Experiment Factors: time
GeneChip Type: Poplar61k
Experiment design (15 hybridizations)
time
•April •May •June •July •August

13/48 Experiment PT37 affy_rnai_cadpoplars: Transcriptome analysis of RNAi-CAD transgenic poplars
Submitter: PLEXdb Curator
Head of Lab: Claire Lurin
Experiment Factors: genetic line
GeneChip Type: Poplar61k
Experiment design (4 hybridizations)
genetic line
•RNAi-CAD •control

14/48 Experiment PT36 Transcriptome response to embolism in stems of P. trichocarpa
Submitter: PLEXdb Curator
Head of Lab: Maciej Zwieniecki
Experiment Factors: treatment
GeneChip Type: Poplar61k
Experiment design (9 hybridizations)
treatment
•control •embolism •sucrose

15/48 Experiment PT35 Genome-wide transcript profiling associated with metabolic regulation of Poplar N storage and cycling
Submitter: PLEXdb Curator
Head of Lab: Gary Coleman
Experiment Factors: treatment
GeneChip Type: Poplar61k
Experiment design (30 hybridizations)
treatment
•water 48hrs •water 72hrs •glutamin 48hrs •glutamin 72hrs •glucose 48hrs •glucose 72hrs •glutamine+glucose 48hrs •glutamine+glucose 72hrs •control 1 •preincubated control 2

16/48 Experiment PT34 Expression data of male and female floral bud with Populus tomentosa during their development process.
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: organism part name
GeneChip Type: Poplar61k
Experiment design (2 hybridizations)
organism part name
•male bud •female bud

17/48 Experiment PT33 Clone History Shapes Populus Drought Responses
Submitter: PLEXdb Curator
Head of Lab: Malcolm M. Campbell
Experiment Factors: genetic line, growth condition, time
GeneChip Type: Poplar61k
Experiment design (72 hybridizations)
time
•A.M. •P.M.
genetic line
•DN(MB) •DN(SK) •WK(AB) •WK(SK) •WP(AB) •WP(SK)
growth condition
•well-watered •water-limited

18/48 Experiment PT32 FT1 and FT2 network analysis in poplar
Submitter: PLEXdb Curator
Head of Lab: Cetin Yuceer
Experiment Factors: treatment
GeneChip Type: Poplar61k
Experiment design (25 hybridizations)
treatment
•Heat Inducible FT1 •Heat Inducible FT2 •Heat Inducible WT Control •Overexpression FT1 •Overexpression FT2 •Overexpression Control FT1 •Overexpression Control FT2

19/48 Experiment PT31 Isolation of poplar genes involved in xylem vessel differentiation
Submitter: PLEXdb Curator
Head of Lab: Taku Demura
Experiment Factors: compound
GeneChip Type: Poplar61k
Experiment design (6 hybridizations)
compound
•mock •DEX

20/48 Experiment PT30 Novel aspects of transcriptional regulation in the winter survival and maintenance mechanism of perennial woody plants, poplar.
Submitter: PLEXdb Curator
Head of Lab: Kyung-Hwan Han
Experiment Factors: growth condition
GeneChip Type: Poplar61k
Experiment design (4 hybridizations)
growth condition
•summer •winter

21/48 Experiment PT29 Time-course leaf expression data from Populus deltoides
Submitter: PLEXdb Curator
Head of Lab: Cetin Yuceer
Experiment Factors: time
GeneChip Type: Poplar61k
Experiment design (24 hybridizations)
time
•Feb05(pre-formed) •Mar05(pre-formed) •Sep05(pre-formed) •Dec05(pre-formed) •Mar06(pre-formed) •Apr06(mature) •May06(mature) •Jun06(mature)

22/48 Experiment PT28 affy_popsec_nancy_leaves2007_poplar -Molecular bases of acclimatation and adaptation to water deficit in poplar
Submitter: PLEXdb Curator
Head of Lab: Claire Lurin
Experiment Factors: genotype, stress condition
GeneChip Type: Poplar61k
Experiment design (16 hybridizations)
genotype
•Soligo •Carpacio
stress condition
•control •mild water deficit •moderate water deficit •early-drought stress

23/48 Experiment PT27 affy_popsec_nancy_leaves2008_poplar -Molecular bases of acclimatation and adaptation to water deficit in poplar
Submitter: PLEXdb Curator
Head of Lab: Claire Lurin
Experiment Factors: genotype, stress condition
GeneChip Type: Poplar61k
Experiment design (8 hybridizations)
genotype
•Soligo •Carpacio
stress condition
•control •water deficit

24/48 Experiment PT26 affy_popsec_nancy_roots_poplar -Molecular bases of acclimation and adaptation to water deficit in poplar
Submitter: PLEXdb Curator
Head of Lab: Claire Lurin
Experiment Factors: cultivar, stress condition
GeneChip Type: Poplar61k
Experiment design (16 hybridizations)
cultivar
•Soligo •Carpacio
stress condition
•Control(CTL) •mild water deficit(AMI) •moderate water deficit(AMO) •early-drought stress(EAR)

25/48 Experiment PT25 affy_popsec_nancy_pophydro_roots_poplar -Molecular bases of acclimation and adaptation to water deficit in poplar
Submitter: PLEXdb Curator
Head of Lab: Claire Lurin
Experiment Factors: stress condition
GeneChip Type: Poplar61k
Experiment design (4 hybridizations)
stress condition
•control •water deficit(PEG)

26/48 Experiment PT24 Poplar cultivars Soligo and Carpacio
Submitter: PLEXdb Curator
Head of Lab: Claire Lurin
Experiment Factors: genetic line
GeneChip Type: Poplar61k
Experiment design (4 hybridizations)
genetic line
•Soligo gDNA •Carpacio gDNA

27/48 Experiment PT23 Intraspecific variation in the Populus balsamifera drought transcriptome
Submitter: PLEXdb Curator
Head of Lab: Malcolm M. Campbell
Experiment Factors: genotype, stress condition, time
GeneChip Type: Poplar61k
Experiment design (72 hybridizations)
genotype
•AP-947 •AP-1005 •AP-1006 •AP-2278 •AP-2298 •AP-2300
stress condition
•well watered •water limited
time
•predawn •midday

28/48 Experiment PT22 Genotype and time of day shape the Populus drought response
Submitter: PLEXdb Curator
Head of Lab: Malcolm M. Campbell
Experiment Factors: genotype, stress condition, time
GeneChip Type: Poplar61k
Experiment design (48 hybridizations)
genotype
•DN34 •NM6
time
•midnight •predawn •midday •lateday
stress condition
•well watered •water limited

29/48 Experiment PT21 Endogenous overexpression of Poplar MYB186 increases trichome density, improves growth rate and insect pest resistance
Submitter: PLEXdb Curator
Head of Lab: Sharon Regan
Experiment Factors: genotype
GeneChip Type: Poplar61k
Experiment design (6 hybridizations)
genotype
•wildtype •fuzzy

30/48 Experiment PT20 rewatering-Global gene expression in young differentiating xylem of poplar in response to a drought –rewatering cycle
Submitter: PLEXdb Curator
Head of Lab: Martin-Magniette ML
Experiment Factors: stress condition
GeneChip Type: Poplar61k
Experiment design (6 hybridizations)
stress condition
•Irrigated Control •Water Deficit •Water Deficit Recovery

31/48 Experiment PT19 Characterization of Populus Class III HDZIPs
Submitter: PLEXdb Curator
Head of Lab: Andrew Groover
Experiment Factors: genotype
GeneChip Type: Poplar61k
Experiment design (12 hybridizations)
genotype
•HBMut2-4-1 •HBMut3-8-1 •wildtype

32/48 Experiment PT18 Transcriptomic response to aluminum stress in roots of aspen (Populus tremula L.)
Submitter: PLEXdb Curator
Head of Lab: Christoph Sperisen
Experiment Factors: compound, time
GeneChip Type: Poplar61k
Experiment design (18 hybridizations)
compound
•aluminum •control
time
•6 hrs •54 hrs •246 hrs

33/48 Experiment PT17 Gene expression response of Populus tremuloides cell suspension cultures to methyl jasmonate feeding
Submitter: PLEXdb Curator
Head of Lab: Scott A. Harding
Experiment Factors: compound
GeneChip Type: Poplar61k
Experiment design (4 hybridizations)
compound
•methyl jasmonate •control

34/48 Experiment PT16 Wound-induced gene expression changes in Populus: 90 hours; clone RM5
Submitter: PLEXdb Curator
Head of Lab: Scott A. Harding
Experiment Factors: stress condition, tissue type name
GeneChip Type: Poplar61k
Experiment design (8 hybridizations)
tissue type name
•leaf(LPI5) •root
stress condition
•control •wounded

35/48 Experiment PT15 Wound-induced gene expression changes in Populus: 1 week; clone RM5
Submitter: PLEXdb Curator
Head of Lab: Scott A. Harding
Experiment Factors: developmental stage name, stress condition
GeneChip Type: Poplar61k
Experiment design (8 hybridizations)
developmental stage name
•mature(LPI5) •young(LPI1)
stress condition
•control •wounded

36/48 Experiment PT14 Expression data from GA-modified polpar transgenic roots
Submitter: PLEXdb Curator
Head of Lab: Victor B. Busov
Experiment Factors: genotype
GeneChip Type: Poplar61k
Experiment design (12 hybridizations)
genotype
•wildtype •GA2ox1_dwarf •GA2ox1_semidwarf •GA2ox1_WTlike •rgl1_WTlike •rgl1_dwarf

37/48 Experiment PT13 Expression data from poplar apices
Submitter: PLEXdb Curator
Head of Lab: Victor Busov
Experiment Factors: genotype
GeneChip Type: Poplar61k
Experiment design (4 hybridizations)
genotype
•P35S::EBB1 •wildtype

38/48 Experiment PT11 Genome scale transcriptome analysis of shoot organogenesis in poplar
Submitter: PLEXdb Curator
Head of Lab: Steven H. Strauss
Experiment Factors: Organ Induction
GeneChip Type: Poplar61k
Experiment design (10 hybridizations)
Organ Induction
•before_cal_ind •3d_after_cal_ind •15d_after_cal_ind •3d_after_shoot_ind •8d_after_shoot_ind

39/48 Experiment PT10 Habituation to thaxtomin A provides enhanced and durable resistance to inhibitors of cellulose synthesis
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: compound
GeneChip Type: Poplar61k
Experiment design (6 hybridizations)
compound
•Non_Habituated •TA_Habituated

40/48 Experiment PT9 Expression profiling and functional analysis of poplar WRKY23 reveals a regulatory role in defense
Submitter: PLEXdb Curator
Head of Lab: Armand Séguin
Experiment Factors: genotype, pathogen inoculation
GeneChip Type: Poplar61k
Experiment design (15 hybridizations)
pathogen inoculation
•Mock-inoculated •Mmt-inoculated
genotype
•Wild Type •WRKY23-overexpressor •WRKY23-RNAi

41/48 Experiment PT8 Expression profiling and functional analysis of poplar WRKY23 reveals a regulatory role in defense: WRKY23-RNAi
Submitter: PLEXdb Curator
Head of Lab: Armand Séguin
Experiment Factors: genotype
GeneChip Type: Poplar61k
Experiment design (6 hybridizations)
genotype
•Wild Type •WRKY23-RNAi

42/48 Experiment PT7 Expression profiling and functional analysis of poplar WRKY23 reveals a regulatory role in defense: WRKY23-overexpressor
Submitter: PLEXdb Curator
Head of Lab: Armand Séguin
Experiment Factors: genotype, pathogen inoculation
GeneChip Type: Poplar61k
Experiment design (12 hybridizations)
genotype
•Wild Type •WRKY23-overexpressor
pathogen inoculation
•Mock •Mmt-inoculated

43/48 Experiment PT6 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: developmental stage name, line, stress condition, treatment
GeneChip Type: Poplar61k
Experiment design (24 hybridizations)
line
•clone1979 •clone3200
developmental stage name
•young(LPI2) •mature(LPI5)
stress condition
•5 mM (N+) •0.125 mM (N-)
treatment
•4weeks •8weeks

44/48 Experiment PT5 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 3200
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: developmental stage name, stress condition, treatment
GeneChip Type: Poplar61k
Experiment design (12 hybridizations)
developmental stage name
•young(LPI2) •mature(LPI5)
stress condition
•5 mM (N+) •0.125 mM (N-)
treatment
•4weeks •8weeks

45/48 Experiment PT4 Effect of hypoxia on gene expression in Grey poplar
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: organism part name, time, treatment
GeneChip Type: Poplar61k
Experiment design (30 hybridizations)
time
•0 hrs •5 hrs •24 hrs •168 hrs
organism part name
•leaf •root
treatment
•control •flooded

46/48 Experiment PT3 Comparative transcriptomics analysis of Populus leaves under nitrogen limitation: clone 1979
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: developmental stage name, stress condition, treatment
GeneChip Type: Poplar61k
Experiment design (12 hybridizations)
developmental stage name
•young(LPI2) •mature(LPI5)
stress condition
•5 mM (N+) •0.125 mM (N-)
treatment
•4 weeks •8 weeks

47/48 Experiment PT2 Populus balsamifera developmental tissue series
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: tissue type name
GeneChip Type: Poplar61k
Experiment design (27 hybridizations)
tissue type name
•Seedling_continuous_light •Etiolated_seedling_6d_transfered_to_light •Etiolated_seedling •young_leaf_midday •root_midday •differentiating_xylem_midday •Female_Catkin_midday •Male_Catkin_midday •mature_leaf_midday

48/48 Experiment PT1 Comparative transcriptomic reveals signatures specific to various interactions with Melampsora rust fungi
Submitter: PLEXdb Curator
Head of Lab: --
Experiment Factors: infection
GeneChip Type: Poplar61k
Experiment design (12 hybridizations)
infection
•Non_infected •Mlp_infected •Mmd_infected •Mixed_infected

 
Copyright@2001-2009 The PLEXdb Group
All rights reserved.

For problems with the webpages contact PLEXdb webmasters