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Probe Set:Contig3_at
Description:BEST BLASTX NR: 11/06/02 P13691 9e-69 ALPHA-AMYLASE INHIBITOR BDAI-I PRECURSOR pir||S00332 alpha-amylase inhibitor precursor (clone pUP-44) - barley
Probe:Contig3_at_55
Sequence:AAGAGTGTAGCTACCGATCGATATA
Probe:Contig3_at_128
Sequence:AAGAGCATGTTGTTGGTGCTCCTGC
Probe:Contig3_at_143
Sequence:GTGCTCCTGCTATGCATGCTCATGG
Probe:Contig3_at_156
Sequence:GCATGCTCATGGTGACTCCAATGAC
Probe:Contig3_at_164
Sequence:ATGGTGACTCCAATGACGGGCGCAC
Probe:Contig3_at_175
Sequence:AATGACGGGCGCACGGAGTGATAAC
Probe:Contig3_at_189
Sequence:GGAGTGATAACAGTGGCCCTTGGAT
Probe:Contig3_at_202
Sequence:TGGCCCTTGGATGTGGTGTGATCCT
Probe:Contig3_at_216
Sequence:GGTGTGATCCTGAGATGGGCCACAA
Probe:Contig3_at_230
Sequence:ATGGGCCACAAGGTGAGCCCGCTCA
Probe:Contig3_at_610
Sequence:GTGTGCGCGCACAAGATGAATAAAA
Probe:Contig255_at_109
Sequence:TCTACTACTATCTTAATCAGTTGCT
Probe:Contig255_at_103
Sequence:TTCCCATCTACTACTATCTTAATCA
Probe:Contig255_at_100
Sequence:CCATTCCCATCTACTACTATCTTAA
Probe:Contig255_at_75
Sequence:AACATGCTCTTCATCCACATTGCTC
Probe:Contig255_at_14
Sequence:GTTATCACTCCGTGCGCCCGTCATT
Probe:HF19N13r_s_at_26
Sequence:ACGCGCTGCCGAGCATTGGTGAAGC
Probe:HF19N13r_s_at_45
Sequence:TGAAGCTCGAGTGTGTGGGCAACCG
Probe:HF19N13r_s_at_66
Sequence:ACCGGGTGCCCGAGGATGTCCTAAG
Probe:HF19N13r_s_at_79
Sequence:GGATGTCCTAAGAGACTGCTGCCAG
Probe:HF19N13r_s_at_93
Sequence:ACTGCTGCCAGGAGGTGGCCAACAT
Probe:HF19N13r_s_at_105
Sequence:AGGTGGCCAACATCAGCAACGAGTG
Probe:HF19N13r_s_at_115
Sequence:CATCAGCAACGAGTGGTGCAGGTGC
Probe:HF19N13r_s_at_148
Sequence:CGGCAGCATGCTGCGCAGCGTGTAT
Probe:HF19N13r_s_at_207
Sequence:TGTTCCCGGGTTGCCAGAAGGATGT
Probe:HF19N13r_s_at_248
Sequence:GCAGGCGTGCCTGCGCTCTGCAATG
Probe:HF19N13r_s_at_269
Sequence:AATGTCCCCATTCCCAACGAGGCGG
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Details about the Probe
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See EST contig alignment
at PlantGDB
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| No. |
Exemplar Name |
Probe |
Start |
End |
Sequence |
Probe Set Expression |
| 1 |
Barley1_00003 |
Contig255_at_109 |
68 |
92 |
TCTACTACTATCTTAATCAGTTGCT |
Contig255_at |
| 2 |
Barley1_00003 |
Contig255_at_103 |
74 |
98 |
TTCCCATCTACTACTATCTTAATCA |
Contig255_at |
| 3 |
Barley1_00003 |
Contig255_at_100 |
77 |
101 |
CCATTCCCATCTACTACTATCTTAA |
Contig255_at |
| 4 |
Barley1_00003 |
Contig255_at_75 |
102 |
126 |
AACATGCTCTTCATCCACATTGCTC |
Contig255_at |
| 5 |
Barley1_00003 |
Contig255_at_14 |
163 |
187 |
GTTATCACTCCGTGCGCCCGTCATT |
Contig255_at |
| 1 |
Barley1_00003 |
Contig3_at_55 |
43 |
67 |
AAGAGTGTAGCTACCGATCGATATA |
Contig3_at |
| 2 |
Barley1_00003 |
Contig3_at_128 |
116 |
140 |
AAGAGCATGTTGTTGGTGCTCCTGC |
Contig3_at |
| 3 |
Barley1_00003 |
Contig3_at_143 |
131 |
155 |
GTGCTCCTGCTATGCATGCTCATGG |
Contig3_at |
| 4 |
Barley1_00003 |
Contig3_at_156 |
144 |
168 |
GCATGCTCATGGTGACTCCAATGAC |
Contig3_at |
| 5 |
Barley1_00003 |
Contig3_at_164 |
152 |
176 |
ATGGTGACTCCAATGACGGGCGCAC |
Contig3_at |
| 6 |
Barley1_00003 |
Contig3_at_175 |
163 |
187 |
AATGACGGGCGCACGGAGTGATAAC |
Contig3_at |
| 7 |
Barley1_00003 |
Contig3_at_189 |
177 |
201 |
GGAGTGATAACAGTGGCCCTTGGAT |
Contig3_at |
| 8 |
Barley1_00003 |
Contig3_at_202 |
190 |
214 |
TGGCCCTTGGATGTGGTGTGATCCT |
Contig3_at |
| 9 |
Barley1_00003 |
Contig3_at_216 |
204 |
228 |
GGTGTGATCCTGAGATGGGCCACAA |
Contig3_at |
| 10 |
Barley1_00003 |
Contig3_at_230 |
218 |
242 |
ATGGGCCACAAGGTGAGCCCGCTCA |
Contig3_at |
| 11 |
Barley1_00003 |
Contig3_at_610 |
598 |
622 |
GTGTGCGCGCACAAGATGAATAAAA |
Contig3_at |
| 1 |
Barley1_00003 |
HF19N13r_s_at_26 |
242 |
266 |
ACGCGCTGCCGAGCATTGGTGAAGC |
HF19N13r_s_at |
| 2 |
Barley1_00003 |
HF19N13r_s_at_45 |
261 |
285 |
TGAAGCTCGAGTGTGTGGGCAACCG |
HF19N13r_s_at |
| 3 |
Barley1_00003 |
HF19N13r_s_at_66 |
282 |
306 |
ACCGGGTGCCCGAGGATGTCCTAAG |
HF19N13r_s_at |
| 4 |
Barley1_00003 |
HF19N13r_s_at_79 |
295 |
319 |
GGATGTCCTAAGAGACTGCTGCCAG |
HF19N13r_s_at |
| 5 |
Barley1_00003 |
HF19N13r_s_at_93 |
309 |
333 |
ACTGCTGCCAGGAGGTGGCCAACAT |
HF19N13r_s_at |
| 6 |
Barley1_00003 |
HF19N13r_s_at_105 |
321 |
345 |
AGGTGGCCAACATCAGCAACGAGTG |
HF19N13r_s_at |
| 7 |
Barley1_00003 |
HF19N13r_s_at_115 |
331 |
355 |
CATCAGCAACGAGTGGTGCAGGTGC |
HF19N13r_s_at |
| 8 |
Barley1_00003 |
HF19N13r_s_at_148 |
364 |
388 |
CGGCAGCATGCTGCGCAGCGTGTAT |
HF19N13r_s_at |
| 9 |
Barley1_00003 |
HF19N13r_s_at_207 |
423 |
447 |
TGTTCCCGGGTTGCCAGAAGGATGT |
HF19N13r_s_at |
| 10 |
Barley1_00003 |
HF19N13r_s_at_248 |
464 |
488 |
GCAGGCGTGCCTGCGCTCTGCAATG |
HF19N13r_s_at |
| 11 |
Barley1_00003 |
HF19N13r_s_at_269 |
485 |
509 |
AATGTCCCCATTCCCAACGAGGCGG |
HF19N13r_s_at |
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