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Probe Set:Contig16_at
Description:BEST BLASTX NR: 11/04/02 NP_175868.1 9e-47 histone H2A, putative; protein id: At1g54690.1, supported by cDNA: 16879., supported by cDNA: gi_15724171, supported by
Probe:Contig16_at_65
Sequence:TCCACCATCCGTAGCGACCAGAAGA
Probe:Contig16_at_122
Sequence:AAGGCGGCGTCCAAGATCGTCTCGC
Probe:Contig16_at_200
Sequence:AAGATCGGCAAGTACGCCCAGCGCG
Probe:Contig16_at_375
Sequence:TGAGTCGGCTTCTGGGCACGGTCAC
Probe:Contig16_at_440
Sequence:CTGCTCCCCAAGAAAGTCGGCAAGG
Probe:Contig16_at_481
Sequence:CTCTGCGTCGCAGGAGTTCTAGAGC
Probe:Contig16_at_501
Sequence:AGAGCCTCGCAGATGAAACCAGCAT
Probe:Contig16_at_541
Sequence:GAGGACTCTTCTTTTTCTAGTATGG
Probe:Contig16_at_562
Sequence:ATGGCGATGCTTTAGGTTGTTAGAT
Probe:Contig16_at_584
Sequence:GATTAGTTCTCGGTCAATGCTTTGG
Probe:Contig16_at_599
Sequence:AATGCTTTGGTTGGTGTATCGATGA
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Details about the Probe
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See EST contig alignment
at PlantGDB
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| No. |
Exemplar Name |
Probe |
Start |
End |
Sequence |
Probe Set Expression |
|---|
| 1 |
Barley1_00016 |
Contig16_at_65 |
53 |
77 |
TCCACCATCCGTAGCGACCAGAAGA |
Contig16_at |
| 2 |
Barley1_00016 |
Contig16_at_122 |
110 |
134 |
AAGGCGGCGTCCAAGATCGTCTCGC |
Contig16_at |
| 3 |
Barley1_00016 |
Contig16_at_200 |
188 |
212 |
AAGATCGGCAAGTACGCCCAGCGCG |
Contig16_at |
| 4 |
Barley1_00016 |
Contig16_at_375 |
363 |
387 |
TGAGTCGGCTTCTGGGCACGGTCAC |
Contig16_at |
| 5 |
Barley1_00016 |
Contig16_at_440 |
428 |
452 |
CTGCTCCCCAAGAAAGTCGGCAAGG |
Contig16_at |
| 6 |
Barley1_00016 |
Contig16_at_481 |
469 |
493 |
CTCTGCGTCGCAGGAGTTCTAGAGC |
Contig16_at |
| 7 |
Barley1_00016 |
Contig16_at_501 |
489 |
513 |
AGAGCCTCGCAGATGAAACCAGCAT |
Contig16_at |
| 8 |
Barley1_00016 |
Contig16_at_541 |
529 |
553 |
GAGGACTCTTCTTTTTCTAGTATGG |
Contig16_at |
| 9 |
Barley1_00016 |
Contig16_at_562 |
550 |
574 |
ATGGCGATGCTTTAGGTTGTTAGAT |
Contig16_at |
| 10 |
Barley1_00016 |
Contig16_at_584 |
572 |
596 |
GATTAGTTCTCGGTCAATGCTTTGG |
Contig16_at |
| 11 |
Barley1_00016 |
Contig16_at_599 |
587 |
611 |
AATGCTTTGGTTGGTGTATCGATGA |
Contig16_at |
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