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Probe Set:Contig39_at
Description:BEST BLASTX NR: 11/06/02 NP_568040.1 6e-60 (NM_119999) expressed protein; protein id: At4g38370.1, supported by cDNA: 249631. [Arabidopsis thaliana]
Probe:Contig39_at_326
Sequence:TTGAGGGTCCTAGCTGCAAGGCAAC
Probe:Contig39_at_341
Sequence:GCAAGGCAACCGTGGAACTTCGTGA
Probe:Contig39_at_430
Sequence:GATGAAGCAGATCCCTTTCTGGCTC
Probe:Contig39_at_516
Sequence:AGACGTGGAGTTTCATGGCTCTGCT
Probe:Contig39_at_530
Sequence:ATGGCTCTGCTGTTCTTATTGTCAG
Probe:Contig39_at_617
Sequence:TCCTCGACAAGGTAGCTGGCCTGAA
Probe:Contig39_at_646
Sequence:GAAAGCCTGATAGTTCCATCCGTGT
Probe:Contig39_at_705
Sequence:AGAGCTGCGTCGAGTCGTGTGACCC
Probe:Contig39_at_723
Sequence:GTGACCCGACACAGATTTGATCATA
Probe:Contig39_at_812
Sequence:AAAATGTTGTTCGATGGCACTCCAT
Probe:Contig39_at_856
Sequence:GAAGATCTGCTTGTAACCGTGAAAA
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Details about the Probe
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See EST contig alignment
at PlantGDB
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| No. |
Exemplar Name |
Probe |
Start |
End |
Sequence |
Probe Set Expression |
|---|
| 1 |
Barley1_00039 |
Contig39_at_326 |
314 |
338 |
TTGAGGGTCCTAGCTGCAAGGCAAC |
Contig39_at |
| 2 |
Barley1_00039 |
Contig39_at_341 |
329 |
353 |
GCAAGGCAACCGTGGAACTTCGTGA |
Contig39_at |
| 3 |
Barley1_00039 |
Contig39_at_430 |
418 |
442 |
GATGAAGCAGATCCCTTTCTGGCTC |
Contig39_at |
| 4 |
Barley1_00039 |
Contig39_at_516 |
504 |
528 |
AGACGTGGAGTTTCATGGCTCTGCT |
Contig39_at |
| 5 |
Barley1_00039 |
Contig39_at_530 |
518 |
542 |
ATGGCTCTGCTGTTCTTATTGTCAG |
Contig39_at |
| 6 |
Barley1_00039 |
Contig39_at_617 |
605 |
629 |
TCCTCGACAAGGTAGCTGGCCTGAA |
Contig39_at |
| 7 |
Barley1_00039 |
Contig39_at_646 |
634 |
658 |
GAAAGCCTGATAGTTCCATCCGTGT |
Contig39_at |
| 8 |
Barley1_00039 |
Contig39_at_705 |
693 |
717 |
AGAGCTGCGTCGAGTCGTGTGACCC |
Contig39_at |
| 9 |
Barley1_00039 |
Contig39_at_723 |
711 |
735 |
GTGACCCGACACAGATTTGATCATA |
Contig39_at |
| 10 |
Barley1_00039 |
Contig39_at_812 |
800 |
824 |
AAAATGTTGTTCGATGGCACTCCAT |
Contig39_at |
| 11 |
Barley1_00039 |
Contig39_at_856 |
844 |
868 |
GAAGATCTGCTTGTAACCGTGAAAA |
Contig39_at |
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