Probe Set:Contig1637_s_at
Description:BEST BLASTX NR: 11/06/02 D38664 e-162 glucan endo-1,3-beta-D-glucosidase (EC 3.2.1.39) precursor - barley gb|AAA32939.1| (M62907) (1-3)-beta-glucanase [Hordeum vulgare]
Probe:Contig1637_at_662
Sequence:TCGCGTACCGTGACAACCCCGGGAG
Probe:Contig1637_at_666
Sequence:GTACCGTGACAACCCCGGGAGCATC
Probe:Contig1637_at_673
Sequence:GACAACCCCGGGAGCATCAGCCTGA
Probe:Contig1637_at_676
Sequence:AACCCCGGGAGCATCAGCCTGAACT
Probe:Contig1637_at_682
Sequence:GGGAGCATCAGCCTGAACTACGCGA
Probe:Contig1637_at_685
Sequence:AGCATCAGCCTGAACTACGCGACGT
Probe:Contig1637_at_686
Sequence:GCATCAGCCTGAACTACGCGACGTT
Probe:Contig1637_at_687
Sequence:CATCAGCCTGAACTACGCGACGTTC
Probe:Contig1637_at_716
Sequence:CGGGCACCACCGTGCGTGACCAGAA
Probe:Contig1637_at_727
Sequence:GTGCGTGACCAGAACAACGGGCTGA
Probe:Contig1637_at_729
Sequence:GCGTGACCAGAACAACGGGCTGACC
Probe:HVSMEm0003C15r2_s_at_135
Sequence:CGGCAATGCGCGGACGTACAACCAG
Probe:HVSMEm0003C15r2_s_at_136
Sequence:GGCAATGCGCGGACGTACAACCAGG
Probe:HVSMEm0003C15r2_s_at_328
Sequence:GTGTAGCTACCTAGCTCACATACCT
Probe:HVSMEm0003C15r2_s_at_329
Sequence:TGTAGCTACCTAGCTCACATACCTA
Probe:HVSMEm0003C15r2_s_at_330
Sequence:GTAGCTACCTAGCTCACATACCTAA
Probe:HVSMEm0003C15r2_s_at_331
Sequence:TAGCTACCTAGCTCACATACCTAAA
Probe:HVSMEm0003C15r2_s_at_332
Sequence:AGCTACCTAGCTCACATACCTAAAT
Probe:HVSMEm0003C15r2_s_at_333
Sequence:GCTACCTAGCTCACATACCTAAATA
Probe:HVSMEm0003C15r2_s_at_336
Sequence:ACCTAGCTCACATACCTAAATAAAT
Probe:HVSMEm0003C15r2_s_at_349
Sequence:ACCTAAATAAATAAGCTGCACGTAC
Probe:HVSMEm0003C15r2_s_at_355
Sequence:ATAAATAAGCTGCACGTACGTACGT
Probe:Contig1637_s_at_1012
Sequence:GAGAGGAGCTTCGGGCTCTTCAACC
Probe:Contig1637_s_at_1125
Sequence:GTAATGCGGCATCCAAGTGTAACGT
Probe:Contig1637_s_at_1130
Sequence:GCGGCATCCAAGTGTAACGTAGACA
Probe:Contig1637_s_at_1145
Sequence:AACGTAGACACGTACATTCATCCAT
Probe:Contig1637_s_at_1150
Sequence:AGACACGTACATTCATCCATGGAAG
Probe:Contig1637_s_at_1160
Sequence:ATTCATCCATGGAAGAGTGCAACCA
Probe:Contig1637_s_at_1174
Sequence:GAGTGCAACCAAGCATGCGTTAACT
Probe:Contig1637_s_at_1180
Sequence:AACCAAGCATGCGTTAACTTCCTGG
Probe:Contig1637_s_at_1186
Sequence:GCATGCGTTAACTTCCTGGTGATGA
Probe:Contig1637_s_at_1190
Sequence:GCGTTAACTTCCTGGTGATGATACA
Probe:Contig1637_s_at_1194
Sequence:TAACTTCCTGGTGATGATACATCAT
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Details about the Probe
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See EST contig alignment
at PlantGDB
|
| No. |
Exemplar Name |
Probe |
Start |
End |
Sequence |
Probe Set Expression |
| 1 |
Barley1_01637 |
Contig1637_at_662 |
650 |
674 |
TCGCGTACCGTGACAACCCCGGGAG |
Contig1637_at |
| 2 |
Barley1_01637 |
Contig1637_at_666 |
654 |
678 |
GTACCGTGACAACCCCGGGAGCATC |
Contig1637_at |
| 3 |
Barley1_01637 |
Contig1637_at_673 |
661 |
685 |
GACAACCCCGGGAGCATCAGCCTGA |
Contig1637_at |
| 4 |
Barley1_01637 |
Contig1637_at_676 |
664 |
688 |
AACCCCGGGAGCATCAGCCTGAACT |
Contig1637_at |
| 5 |
Barley1_01637 |
Contig1637_at_682 |
670 |
694 |
GGGAGCATCAGCCTGAACTACGCGA |
Contig1637_at |
| 6 |
Barley1_01637 |
Contig1637_at_685 |
673 |
697 |
AGCATCAGCCTGAACTACGCGACGT |
Contig1637_at |
| 7 |
Barley1_01637 |
Contig1637_at_686 |
674 |
698 |
GCATCAGCCTGAACTACGCGACGTT |
Contig1637_at |
| 8 |
Barley1_01637 |
Contig1637_at_687 |
675 |
699 |
CATCAGCCTGAACTACGCGACGTTC |
Contig1637_at |
| 9 |
Barley1_01637 |
Contig1637_at_716 |
704 |
728 |
CGGGCACCACCGTGCGTGACCAGAA |
Contig1637_at |
| 10 |
Barley1_01637 |
Contig1637_at_727 |
715 |
739 |
GTGCGTGACCAGAACAACGGGCTGA |
Contig1637_at |
| 11 |
Barley1_01637 |
Contig1637_at_729 |
717 |
741 |
GCGTGACCAGAACAACGGGCTGACC |
Contig1637_at |
| 1 |
Barley1_01637 |
Contig1637_s_at_1012 |
1000 |
1024 |
GAGAGGAGCTTCGGGCTCTTCAACC |
Contig1637_s_at |
| 2 |
Barley1_01637 |
Contig1637_s_at_1125 |
1113 |
1137 |
GTAATGCGGCATCCAAGTGTAACGT |
Contig1637_s_at |
| 3 |
Barley1_01637 |
Contig1637_s_at_1130 |
1118 |
1142 |
GCGGCATCCAAGTGTAACGTAGACA |
Contig1637_s_at |
| 4 |
Barley1_01637 |
Contig1637_s_at_1145 |
1133 |
1157 |
AACGTAGACACGTACATTCATCCAT |
Contig1637_s_at |
| 5 |
Barley1_01637 |
Contig1637_s_at_1150 |
1138 |
1162 |
AGACACGTACATTCATCCATGGAAG |
Contig1637_s_at |
| 6 |
Barley1_01637 |
Contig1637_s_at_1160 |
1148 |
1172 |
ATTCATCCATGGAAGAGTGCAACCA |
Contig1637_s_at |
| 7 |
Barley1_01637 |
Contig1637_s_at_1174 |
1162 |
1186 |
GAGTGCAACCAAGCATGCGTTAACT |
Contig1637_s_at |
| 8 |
Barley1_01637 |
Contig1637_s_at_1180 |
1168 |
1192 |
AACCAAGCATGCGTTAACTTCCTGG |
Contig1637_s_at |
| 9 |
Barley1_01637 |
Contig1637_s_at_1186 |
1174 |
1198 |
GCATGCGTTAACTTCCTGGTGATGA |
Contig1637_s_at |
| 10 |
Barley1_01637 |
Contig1637_s_at_1190 |
1178 |
1202 |
GCGTTAACTTCCTGGTGATGATACA |
Contig1637_s_at |
| 11 |
Barley1_01637 |
Contig1637_s_at_1194 |
1182 |
1206 |
TAACTTCCTGGTGATGATACATCAT |
Contig1637_s_at |
| 1 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_135 |
870 |
894 |
CGGCAATGCGCGGACGTACAACCAG |
HVSMEm0003C15r2_s_at |
| 2 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_136 |
871 |
895 |
GGCAATGCGCGGACGTACAACCAGG |
HVSMEm0003C15r2_s_at |
| 3 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_328 |
1063 |
1087 |
GTGTAGCTACCTAGCTCACATACCT |
HVSMEm0003C15r2_s_at |
| 4 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_329 |
1064 |
1088 |
TGTAGCTACCTAGCTCACATACCTA |
HVSMEm0003C15r2_s_at |
| 5 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_330 |
1065 |
1089 |
GTAGCTACCTAGCTCACATACCTAA |
HVSMEm0003C15r2_s_at |
| 6 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_331 |
1066 |
1090 |
TAGCTACCTAGCTCACATACCTAAA |
HVSMEm0003C15r2_s_at |
| 7 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_332 |
1067 |
1091 |
AGCTACCTAGCTCACATACCTAAAT |
HVSMEm0003C15r2_s_at |
| 8 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_333 |
1068 |
1092 |
GCTACCTAGCTCACATACCTAAATA |
HVSMEm0003C15r2_s_at |
| 9 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_336 |
1071 |
1095 |
ACCTAGCTCACATACCTAAATAAAT |
HVSMEm0003C15r2_s_at |
| 10 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_349 |
1084 |
1108 |
ACCTAAATAAATAAGCTGCACGTAC |
HVSMEm0003C15r2_s_at |
| 11 |
Barley1_01637 |
HVSMEm0003C15r2_s_at_355 |
1090 |
1114 |
ATAAATAAGCTGCACGTACGTACGT |
HVSMEm0003C15r2_s_at |
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