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 Data Release Policy 
PLEXdb is committed to making expression data publicly available to researchers world-wide...
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GrapePLEX

MIAME/Plant-compliant and Plant Ontology enhanced expression resources for grape.

  • All Vitis (Grape) Arrays
    Experiments
  • Affymetrix GeneChip 16K Vitis vinifera (Grape) Genome Array:
    The Affymetrix 16K Vitis vinifera GeneChip was created in collaboration with the international grape community within the Affymetrix GeneChip consortia program.
    Affymetrix information page
    Array Annotation
    Experiments ( A List of All Public Affy 16K GeneChip Grape Experiments)
  • Vitis vinifera GrapeGen (Custom Affymetrix Grape) Array:
    Affymetrix Standard 3' design using 25-mers, 11 match/mismatch probepairs per transcript, 11 micron array. GeneChips were designed as described by the manufacturer in their GeneChip Custom Express Array Design Guide (www.affymetrix.com). Poly-A control sequences of dap, lys, phe, and trp from Bacillus subtilis were also included. (Description quoted from GEO, GPL11004)
    Array Annotation
    Experiments ( A List of All Public GrapeGen Experiments)
  • Nimblegen Grape Whole-Genome Microarray 29K 090918-MD (nimbGrape):
    This array was designed at NimbleGen in collaboration with Dr. Massimo Delledonne using the V1 prediction from CRIBI that is based on the 12X assembly produced by the French-Italian consortium. NimbleGen information page
    Array Annotation
    Experiments ( A List of All Public NimbeGen Grape (29K 090918-MD) Experiments)
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2013 Jun
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More than 2,700 registered users from 77 countries have downloaded complete data sets more than 48,600 times. PLEXdb site experienced an average daily visit rate of 1900 in the last 12 months.
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Page last updated: September 23 2011 22:22:18