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PLEXdb is committed to making
expression data publicly available to researchers world-wide...
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GrapePLEX
MIAME/Plant-compliant and Plant Ontology enhanced expression
resources for grape.
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All Vitis (Grape) Arrays
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Affymetrix GeneChip 16K Vitis vinifera (Grape) Genome Array:
The Affymetrix 16K Vitis
vinifera GeneChip was created in collaboration with the
international grape community within the Affymetrix GeneChip consortia program.
Affymetrix information page
Array Annotation
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Vitis vinifera GrapeGen (Custom Affymetrix Grape) Array:
Affymetrix Standard 3' design using 25-mers, 11 match/mismatch
probepairs per transcript, 11 micron array. GeneChips were designed
as described by the manufacturer in their GeneChip Custom Express
Array Design Guide (www.affymetrix.com). Poly-A control sequences
of dap, lys, phe, and trp from Bacillus subtilis were also included.
(Description quoted from
GEO, GPL11004)
Array Annotation
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Nimblegen Grape Whole-Genome Microarray 29K 090918-MD (nimbGrape):
This array was designed at NimbleGen in collaboration with Dr. Massimo Delledonne
using the V1 prediction from CRIBI that is based on the 12X assembly
produced by the French-Italian consortium.
NimbleGen information page
Array Annotation
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PLEXdb Stats:
More than 2,700 registered users from 77 countries have downloaded
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