MIAME/Plant-compliant and Plant Ontology enhanced expression resources for grape.

• All Vitis (Grape) Arrays

  Experiments
  Select an Experiment VV1:short term abiotic stress Cabernet Sauvignon VV2:Long-term Salt & Water Stress in Grapes VV3:Grape berry tissues differentiation VV5:Chardonnay and Cabernet-Sauvignon's berry development VV7:Gene expression associated with compatible viral diseases in grapevine cultivars VV9:High temperature effect on Cabernet Sauvignon berries VV10:Photoperiod regulation of grape bud dormancy VV11:Pinot Noir berry transcriptome during ripening. VV12:Powdery Mildew-Induced Transcriptome in a Susceptible Grapevine ‘Cabernet S... VV13:Powdery Mildew-Induced Transcriptome in a Resistant Grapevine ‘Norton’ VV14:Gene expression in grapevine in response to Bois noir infection VV15:Expression data in individual grape berries during ripening initation VV16:Grape skin transcriptome in the berries grown on the vine treated with exogen... VV17:Grape skin transcriptome in the berries cultured in vitro treated with exogen... VV18:Grape_Bud_Dormancy VV19:Gene expression patterns associated with grapevine resistance to downy mildew... VV28:Gene expression associated with compatible viral diseases in berry VV29:Expression data from micropropagated Vitis vinifera when transferred to ex vi... VV30:The effects of ABA and ABF2 overexpression in cell culture VV31:Expression data from 35S::VvCBF4-overexpressing grapevines VV33:Grape flesh and skin ripening transcriptomic profiling VV36:Time course of grapevine bud development VV40:Transcriptomic analysis during heat stress and after the following recovery i... VV41:Rootstock and soil effects on grape transcriptome VV42:Berry skin development in Norton grape: Distinct patterns of transcriptional ... VV43:Gene expression in leaves of grapevine plants under abiotic stress conditions... VV44:Grapevine cell cultures transcriptomic response to methyl jasmonate and cyclo... VV45:Transcript and metabolite analysis in Trincadeira cultivar reveals novel info... VV46:Effect of temperature and irradiation intensity on grapevine berry ripening i...

• Affymetrix GeneChip 16K Vitis vinifera (Grape) Genome Array:

  The Affymetrix 16K Vitis vinifera GeneChip was created in collaboration with the international grape community within the Affymetrix GeneChip consortia program.
  Affymetrix information page
  Array Annotation
  Experiments ( A List of All Public Affy 16K GeneChip Grape Experiments)
  Select an Experiment VV1:short term abiotic stress Cabernet Sauvignon VV2:Long-term Salt & Water Stress in Grapes VV3:Grape berry tissues differentiation VV5:Chardonnay and Cabernet-Sauvignon's berry development VV7:Gene expression associated with compatible viral diseases in grapevine cultivars VV9:High temperature effect on Cabernet Sauvignon berries VV10:Photoperiod regulation of grape bud dormancy VV11:Pinot Noir berry transcriptome during ripening. VV12:Powdery Mildew-Induced Transcriptome in a Susceptible Grapevine ‘Cabernet S... VV13:Powdery Mildew-Induced Transcriptome in a Resistant Grapevine ‘Norton’ VV14:Gene expression in grapevine in response to Bois noir infection VV15:Expression data in individual grape berries during ripening initation VV16:Grape skin transcriptome in the berries grown on the vine treated with exogen... VV17:Grape skin transcriptome in the berries cultured in vitro treated with exogen... VV18:Grape_Bud_Dormancy VV19:Gene expression patterns associated with grapevine resistance to downy mildew... VV28:Gene expression associated with compatible viral diseases in berry VV29:Expression data from micropropagated Vitis vinifera when transferred to ex vi... VV30:The effects of ABA and ABF2 overexpression in cell culture VV31:Expression data from 35S::VvCBF4-overexpressing grapevines VV33:Grape flesh and skin ripening transcriptomic profiling VV36:Time course of grapevine bud development VV40:Transcriptomic analysis during heat stress and after the following recovery i... VV41:Rootstock and soil effects on grape transcriptome VV42:Berry skin development in Norton grape: Distinct patterns of transcriptional ... VV43:Gene expression in leaves of grapevine plants under abiotic stress conditions... VV44:Grapevine cell cultures transcriptomic response to methyl jasmonate and cyclo... VV45:Transcript and metabolite analysis in Trincadeira cultivar reveals novel info... VV46:Effect of temperature and irradiation intensity on grapevine berry ripening i...

• Vitis vinifera GrapeGen (Custom Affymetrix Grape) Array:

  Affymetrix Standard 3' design using 25-mers, 11 match/mismatch probepairs per transcript, 11 micron array. GeneChips were designed as described by the manufacturer in their GeneChip Custom Express Array Design Guide (www.affymetrix.com). Poly-A control sequences of dap, lys, phe, and trp from Bacillus subtilis were also included. (Description quoted from GEO, GPL11004)
  Array Annotation
  Experiments ( A List of All Public GrapeGen Experiments)
  Select an Experiment VV33:Grape flesh and skin ripening transcriptomic profiling VV36:Time course of grapevine bud development VV42:Berry skin development in Norton grape: Distinct patterns of transcriptional ... VV43:Gene expression in leaves of grapevine plants under abiotic stress conditions... VV44:Grapevine cell cultures transcriptomic response to methyl jasmonate and cyclo... VV45:Transcript and metabolite analysis in Trincadeira cultivar reveals novel info... VV46:Effect of temperature and irradiation intensity on grapevine berry ripening i...

• Nimblegen Grape Whole-Genome Microarray 29K 090918-MD (nimbGrape):

  This array was designed at NimbleGen in collaboration with Dr. Massimo Delledonne using the V1 prediction from CRIBI that is based on the 12X assembly produced by the French-Italian consortium. NimbleGen information page
  Array Annotation
  Experiments ( A List of All Public NimbeGen Grape (29K 090918-MD) Experiments)
  Select an Experiment VV30:The effects of ABA and ABF2 overexpression in cell culture